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197
Bibliographie
S
-G
IGRIST C.J.A., C
L.,
ERUTTI
DE CASTRO E., LANGENDIJK ENEVAUX P.S., BULLIARD
V., B
A., H
N. (2010) PROSITE, a protein domain database for funcAIROCH
ULO
tional characterization and annotation. Nucleic Acids Research 38; D161-D166.
SMITH T.F., WATERMAN M.S. (1981) Identification of Common Molecular Subsequences. Journal of Molecular Biology 147; 195-197.
SONAVANE
HAKRABARTI
S., C
P. (2010) Prediction of Active Site Cleft Using Support
Vector Machines. Journal of Chemical Information and Modeling 50; 2266-2273.
STADEN R. (1982) An Interactive Graphics Program for Comparing and Aligning
Nucleic-Acid and Amino-Acid-Sequences. Nucleic Acids Research 10; 29512961.
UVERSKY V.N., G
J.R., F
ILLESPIE
INK A.L. (2000) Why are “natively unfolded”
proteins unstructured under physiologic conditions?? Proteins – Structure, Function and Genetics, 11, 415-427.
VAN DURME J.J.J., BETTLER
OLKERTSMA
E., F
S., HORN F., VRIEND G. (2003) NRMD:
Nuclear Receptor Mutation Database. Nucleic Acids Research 31; 331-333.
VENKATRAMAN
AEL
V., S
L., KIHARA D. (2009) Potential for Protein Surface Shape
Analysis Using Spherical Harmonics and 3D Zernike Descriptors. Cell Biochemistry and Biophysics 54; 23-32.
VIA A., FERRE F., BRANNETTI B., HELMER-CITTERICH M. (2000) Protein surface similarities: a survey of methods to describe and compare protein surfaces. Cell Mol
Life Sci 57; 1970-7.
VROLING
AAKMAN
B., SANDERS M., B
C., BORRMANN A., VERHOEVEN S., KLOMP J.,
OLIVEIRA L., de VLIEG J., VRIEND G. (2011) GPCRDB: information system for G
protein-coupled receptors. Nucleic Acids Research 39; D309-D319.
VUCETIC
BRADOVIC
S., O
Z., VACIC V., RADIVOJAC
AKOUCHEVA
P., PENG K., I
L.M.,
CORTESE M.S., LAWSON
UNKER
J.D., BROWN C.J., SIKES J.G., NEWTON C.D., D
A.K. (2005) DisProt: a database of protein disorder. Bioinformatics 21; 137-140.
WALLACE A.C., BORKAKOTI
HORNTON
N., T
J.M. (1997) TESS: A geometric hashing
algorithm for deriving 3D coordinate templates for searching structural databases.
Application to enzyme active sites. Protein Science 6; 2308-2323.
WARD R.M., VENNER
URRAY
E., DAINES B., M
S., ERDIN S., KRISTENSEN D.M.,
LICHTARGE O. (2009) Evolutionary Trace Annotation Server: automated enzyme
function prediction in protein structures using 3D templates. Bioinformatics 25;
1426-1427.
WESKAMP
UHN
ULLERMEIER
N., K
D., H
E., KLEBE G. (2004) Efficient similarity
search in protein structure databases by k-clique hashing. Bioinformatics 20;
1522-1526.
197
Bibliographie
S
-G
IGRIST C.J.A., C
L.,
ERUTTI
DE CASTRO E., LANGENDIJK ENEVAUX P.S., BULLIARD
V., B
A., H
N. (2010) PROSITE, a protein domain database for funcAIROCH
ULO
tional characterization and annotation. Nucleic Acids Research 38; D161-D166.
SMITH T.F., WATERMAN M.S. (1981) Identification of Common Molecular Subsequences. Journal of Molecular Biology 147; 195-197.
SONAVANE
HAKRABARTI
S., C
P. (2010) Prediction of Active Site Cleft Using Support
Vector Machines. Journal of Chemical Information and Modeling 50; 2266-2273.
STADEN R. (1982) An Interactive Graphics Program for Comparing and Aligning
Nucleic-Acid and Amino-Acid-Sequences. Nucleic Acids Research 10; 29512961.
UVERSKY V.N., G
J.R., F
ILLESPIE
INK A.L. (2000) Why are “natively unfolded”
proteins unstructured under physiologic conditions?? Proteins – Structure, Function and Genetics, 11, 415-427.
VAN DURME J.J.J., BETTLER
OLKERTSMA
E., F
S., HORN F., VRIEND G. (2003) NRMD:
Nuclear Receptor Mutation Database. Nucleic Acids Research 31; 331-333.
VENKATRAMAN
AEL
V., S
L., KIHARA D. (2009) Potential for Protein Surface Shape
Analysis Using Spherical Harmonics and 3D Zernike Descriptors. Cell Biochemistry and Biophysics 54; 23-32.
VIA A., FERRE F., BRANNETTI B., HELMER-CITTERICH M. (2000) Protein surface similarities: a survey of methods to describe and compare protein surfaces. Cell Mol
Life Sci 57; 1970-7.
VROLING
AAKMAN
B., SANDERS M., B
C., BORRMANN A., VERHOEVEN S., KLOMP J.,
OLIVEIRA L., de VLIEG J., VRIEND G. (2011) GPCRDB: information system for G
protein-coupled receptors. Nucleic Acids Research 39; D309-D319.
VUCETIC
BRADOVIC
S., O
Z., VACIC V., RADIVOJAC
AKOUCHEVA
P., PENG K., I
L.M.,
CORTESE M.S., LAWSON
UNKER
J.D., BROWN C.J., SIKES J.G., NEWTON C.D., D
A.K. (2005) DisProt: a database of protein disorder. Bioinformatics 21; 137-140.
WALLACE A.C., BORKAKOTI
HORNTON
N., T
J.M. (1997) TESS: A geometric hashing
algorithm for deriving 3D coordinate templates for searching structural databases.
Application to enzyme active sites. Protein Science 6; 2308-2323.
WARD R.M., VENNER
URRAY
E., DAINES B., M
S., ERDIN S., KRISTENSEN D.M.,
LICHTARGE O. (2009) Evolutionary Trace Annotation Server: automated enzyme
function prediction in protein structures using 3D templates. Bioinformatics 25;
1426-1427.
WESKAMP
UHN
ULLERMEIER
N., K
D., H
E., KLEBE G. (2004) Efficient similarity
search in protein structure databases by k-clique hashing. Bioinformatics 20;
1522-1526.