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195
Bibliographie
GUERMEUR Y., GEOURJON C., G
G. (1999) Improved perforALLINARI P., DELEAGE
mance in protein secondary structure prediction by inhomogeneous score combination. Bioinformatics 15; 413-421.
HENIKOFF J.G., PIETROKOVSKI
ALLUM
S., MCC
C.M., HENIKOFF S. (2000) Blocksbased methods for detecting protein homology. Electrophoresis 21; 1700-1706.
HENIKOFF S., HENIKOFF J.G. (1992) Amino-Acid Substitution Matrices from Protein
Blocks. Proceedings of the National Academy of Sciences of the United States of
America 89; 10915-10919.
HOFFMANN
ASLAVSKIY
B., Z
M., VERT J.P., STOVEN V. (2010) A new protein binding
pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction. Bmc Bioinformatics 11; -.
HOLM
ANDER
L., S
C. (1997) Dali/FSSP classification of three-dimensional protein
folds. Nucleic Acids Research 25; 231-234.
HORN F., WEARE
EUKERS
J., B
M.W., Horsch S, Bairoch A, Chen W, Edvardsen O,
Campagne F, Vriend G (1998) GPCRDB: an information system for G proteincoupled receptors. Nucleic Acids Research 26; 275-279.
JAMBON
MBERTY
EOURJON
M., I
A., DELEAGE G., G
C. (2003) A new bioinformatic
approach to detect common 3D sites in protein structures. Proteins-Structure
Function and Genetics 52; 137-145.
JANIN J. (2010) Protein-protein docking tested in blind predictions: the CAPRI experiment. Molecular Biosystems 6; 2351-2362.
JANIN
OULT
J., HENRICK K., M
J., TEN EYCK L., STERNBERG M.J.E., VAJDA S., VASKER
I., WODAK S.J. (2003) CAPRI: A Critical Assessment of PRedicted Interactions.
Proteins-Structure Function and Bioinformatics 52; 2-9.
KABSCH W., SANDER . (1983) Dictionary of Protein Secondary Structure - PatternRecognition of Hydrogen-Bonded and Geometrical Features. Biopolymers 22;
2577-2637.
KABSCH W., SANDER C. (1984) On the Use of Sequence Homologies to Predict
Protein-Structure - Identical Pentapeptides Can Have Completely Different
Conformations. Proceedings of the National Academy of Sciences of the United
States of America-Biological Sciences 81; 1075-1078.
KABSCH W., SANDER C. (1985) Identical Pentapeptides with Different Backbones.
Nature 317; 207-207.
KANEHISA
OTO
ATO
URUMICHI
M., G
S., S
Y., F
M., TANABE M. (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids
Research 40; D109-D114.
KING R.D., STERNBERG M.J.E. (1996) Identification and application of the concepts
important for accurate and reliable protein secondary structure prediction. Protein
Science 5; 2298-2310.
KRISTENSEN D.M., WARD R.M., LISEWSKI A.M., ERDIN S., CHEN B.Y., FOFANOV V.Y.,
KIMMEL M., KAVRAKI
ICHTARGE
L.E., L
O. (2008) Prediction of enzyme function
based on 3D templates of evolutionarily important amino acids. Bmc Bioinformatics 9; -.
195
Bibliographie
GUERMEUR Y., GEOURJON C., G
G. (1999) Improved perforALLINARI P., DELEAGE
mance in protein secondary structure prediction by inhomogeneous score combination. Bioinformatics 15; 413-421.
HENIKOFF J.G., PIETROKOVSKI
ALLUM
S., MCC
C.M., HENIKOFF S. (2000) Blocksbased methods for detecting protein homology. Electrophoresis 21; 1700-1706.
HENIKOFF S., HENIKOFF J.G. (1992) Amino-Acid Substitution Matrices from Protein
Blocks. Proceedings of the National Academy of Sciences of the United States of
America 89; 10915-10919.
HOFFMANN
ASLAVSKIY
B., Z
M., VERT J.P., STOVEN V. (2010) A new protein binding
pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction. Bmc Bioinformatics 11; -.
HOLM
ANDER
L., S
C. (1997) Dali/FSSP classification of three-dimensional protein
folds. Nucleic Acids Research 25; 231-234.
HORN F., WEARE
EUKERS
J., B
M.W., Horsch S, Bairoch A, Chen W, Edvardsen O,
Campagne F, Vriend G (1998) GPCRDB: an information system for G proteincoupled receptors. Nucleic Acids Research 26; 275-279.
JAMBON
MBERTY
EOURJON
M., I
A., DELEAGE G., G
C. (2003) A new bioinformatic
approach to detect common 3D sites in protein structures. Proteins-Structure
Function and Genetics 52; 137-145.
JANIN J. (2010) Protein-protein docking tested in blind predictions: the CAPRI experiment. Molecular Biosystems 6; 2351-2362.
JANIN
OULT
J., HENRICK K., M
J., TEN EYCK L., STERNBERG M.J.E., VAJDA S., VASKER
I., WODAK S.J. (2003) CAPRI: A Critical Assessment of PRedicted Interactions.
Proteins-Structure Function and Bioinformatics 52; 2-9.
KABSCH W., SANDER . (1983) Dictionary of Protein Secondary Structure - PatternRecognition of Hydrogen-Bonded and Geometrical Features. Biopolymers 22;
2577-2637.
KABSCH W., SANDER C. (1984) On the Use of Sequence Homologies to Predict
Protein-Structure - Identical Pentapeptides Can Have Completely Different
Conformations. Proceedings of the National Academy of Sciences of the United
States of America-Biological Sciences 81; 1075-1078.
KABSCH W., SANDER C. (1985) Identical Pentapeptides with Different Backbones.
Nature 317; 207-207.
KANEHISA
OTO
ATO
URUMICHI
M., G
S., S
Y., F
M., TANABE M. (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids
Research 40; D109-D114.
KING R.D., STERNBERG M.J.E. (1996) Identification and application of the concepts
important for accurate and reliable protein secondary structure prediction. Protein
Science 5; 2298-2310.
KRISTENSEN D.M., WARD R.M., LISEWSKI A.M., ERDIN S., CHEN B.Y., FOFANOV V.Y.,
KIMMEL M., KAVRAKI
ICHTARGE
L.E., L
O. (2008) Prediction of enzyme function
based on 3D templates of evolutionarily important amino acids. Bmc Bioinformatics 9; -.