Table 5 Analysis of the nucleotide (BLASTn) and amino acid (tBLASTx) sequence of the alkB and xylA genes amplified from the Algerian bacterial isolates
Catabolic
gene
Isolates
code
Size
bp
BLASTn
BLASTx
Description
Similarity
(%)
Accession
number
Description
Similarity (%)
Accession
number
alkB
PSF-12Sw 475 Alcanivorax sp. PA2 alkane hydroxylase (alkB)
gene
99
FJ173005.1
Alkane hydroxylase (Alcanivorax sp. PA2)
100
ACI15226.1
PSF-21Sw 498 Marinobacter salarius strain R9SW1
99
CP007152.1
Alkane 1-monooxygenase (Marinobacter
salarius)
99
WP_085679373.1
PSF-31S
448 Marinobacter sp. P1-14D alkane hydroxylase
(alkB2) gene
99
GQ184211.1 Alkane hydroxylase (Marinobacter
hydrocarbonoclasticus)
100
ACJ22716.1
PSF-5Sw
397 Dietzia sp. IMV 195 FLAG-tagged alkane
hydroxylase-rubredoxin (alkB) and TetR family
transcriptional regulator (tetR) genes
99
KM019157.1 Alkane-1 monooxygenase (Dietzia sp. H0)
99
ACR56751.1
PSF-6S
460 Gordonia sp. S14-10 putative alkane
monooxygenase (alkB) gene
99
GQ145212.1 Putative alkane monooxygenase (Gordonia
sp. S14-10)
99
ACT31522.1
PSF-26Sw 420 Marinobacter hydrocarbonoclasticus strain S174 alkane hydroxylase (alkB) gene
99
EU853368.1
Alkane hydroxylase (Marinobacter
hydrocarbonoclasticus)
98
ACJ22716.1
PSF-43Sw 317 Uncultured bacterium clone KL2c09 alkane
hydroxylase (alkB) gene
99
JN986868.1
Alkane monooxygenase AlkB (Marinobacter
sp. SL004A-39A)
88
ALP44217.1
xylA
PSF-43Sw 145 Marinobacter similis strain A3d10 (xylA gene)
99
CP007151.1
DUF3080 domain-containing protein
(Marinobacter similis)
100
WP_041342712.1
Journal of Applied Microbiology 126, 780--795 © 2018 The Society for Applied Microbiology
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The use of oil-degrading bacteria as an alternative for environmental remediation (bioremediation)
N. Djahnit et al.