469
15 FtIR Imaging of tissues: techniques and methods of Analysis
57. Nasse mJ, Walsh mJ, mattson EC et al (2011) high-resolution Fourier transform infrared
chemical imaging with multiple synchrotron beams. Nat methods 8:413–416
58. dumas P, Jasmin N, teillaud JL et al (2004) Imaging capabilities of synchrotron infrared
microspectroscopy. Faraday discuss 126:289–302
59. Carr gL, Chubar o, dumas P (2005) multichanel detection with a synchrotron light source:
design and potential. In: Bhargava R, Levin I (eds) Spectrochemical analysis using multichanel detectors. Analytical chemistry series, chap. 3. Blackwell, oxford, pp 56–84
60. moss d, gasharova B, mathis YL (2006) Practical tests of a focal plane array detector microscope at the ANKA-IR beamline. Infrared Phys technol 49:53–56
61. Petibois C, Cestelli-guidi m, Piccinini m et al (2010) Synchrotron radiation FtIR imaging
in minutes: a first step towards real-time cell imaging. Anal Bioanal Chem 397:2123–2129
62. hirschmugl CJ, gough Km (2012) Fourier transform infrared spectrochemical imaging: review of design and applications with a focal plane array and multiple beam synchrotron
radiation source. Appl Spectrosc 66:475–491
63. Afseth NK, Kohler A (2012) Extended multiplicative signal correction in vibrational spectroscopy, a tutorial. Chemometr Intel Lab Systems 117:92–99
64. Lan t, Fang Y, Xiong W et al (2007) Automatic baseline correction of infrared spectra. Chin
opt Lett 5:613–616
65. Severcan F, harris PI (2012) vibrational spectroscopy in diagnosis and screening. In: advances in biomedical spectrosocpy, vol. 6. IoS Press
66. Butler WL, hopkins dW (1970) An analysis of fourth derivative spectra. Photochem Photobiol 12:451–456
67. Susi h, Byler dm (1986) Resolution-enhanced Fourier transform infrared spectroscopy of
enzymes. methods Enzymol 130:290–311
68. Savitsky A, golay mJE (1964) Smoothing and differentiation of data by Simplified Least
Squares Procedures. Anal Chem 36:1627–1639
69. van de hulst hC (1981) Light scattering by small particles. dover, New York
70. martens h, Naes t (1989) multivariate Calibration. Wiley, Chichester
71. martens h, Nielsen JP, Engelsen SB (2003) Light scattering and light absorbance separated
by extended multiplicative signal correction. Application to near-infrared transmission analysis of powder mixtures. Anal Chem 75:394–404
72. Chen ZP, morris J, martin E (2006) Extracting chemical information from spectral data with
multiplicative light scattering effects by optical path-length estimation and correction. Anal
Chem 78:7674–7681
73. Kohler A, Sulé-Suso J, Sockalingum gd et al (2008) Estimating and correcting mie scattering in synchrotron-based micorscopic Fourier transform infrared spectra by extended multiplicative signal correction. Appl Spectrosc 62:259–266
74. martens h, Stark E (1991) Extended multiplicative signal correction and spectral interference subtraction: new preprocessing methods for near infrared spectroscopy. J Pharm Biomed
Anal 9:625–635
75. Kohler A, Kirschner C, oust A et al (2005) Extended multiplicative signal correction as a tool
for separation and characterization of physical and chemical information in Fourier transform
infrared microscopy images of cryo-sections of beef loin. Appl Spectrosc 59:707–716
76. Bassan P, Byrne hJ, Bonnier F et al (2009) Resonant mie scattering in infrared spectroscopy
of biological materials-understanding the ‘dispersion artefact’. Analyst 134:1586–1593
77. Bassan P, Kohler A, martens h et al (2010) Resonant mie scattering (Rimes) correction of
infrared spectra from highly scattering biological samples. Analyst 135:268–277
78. Bassan P, Kohler A, martens h et al (2010) Rimes-EmSC correction for infrared spectra of
biological cells: extension using full mie theory and gPu computing. J Biophoton 3:609–
620
79. Bassan P, Byrne hJ, Lee J et al (2009) Reflection contributions to the dispersion artefact in
FtIR spectra of single biological cells. Analyst 134:1171–1175
15 FtIR Imaging of tissues: techniques and methods of Analysis
57. Nasse mJ, Walsh mJ, mattson EC et al (2011) high-resolution Fourier transform infrared
chemical imaging with multiple synchrotron beams. Nat methods 8:413–416
58. dumas P, Jasmin N, teillaud JL et al (2004) Imaging capabilities of synchrotron infrared
microspectroscopy. Faraday discuss 126:289–302
59. Carr gL, Chubar o, dumas P (2005) multichanel detection with a synchrotron light source:
design and potential. In: Bhargava R, Levin I (eds) Spectrochemical analysis using multichanel detectors. Analytical chemistry series, chap. 3. Blackwell, oxford, pp 56–84
60. moss d, gasharova B, mathis YL (2006) Practical tests of a focal plane array detector microscope at the ANKA-IR beamline. Infrared Phys technol 49:53–56
61. Petibois C, Cestelli-guidi m, Piccinini m et al (2010) Synchrotron radiation FtIR imaging
in minutes: a first step towards real-time cell imaging. Anal Bioanal Chem 397:2123–2129
62. hirschmugl CJ, gough Km (2012) Fourier transform infrared spectrochemical imaging: review of design and applications with a focal plane array and multiple beam synchrotron
radiation source. Appl Spectrosc 66:475–491
63. Afseth NK, Kohler A (2012) Extended multiplicative signal correction in vibrational spectroscopy, a tutorial. Chemometr Intel Lab Systems 117:92–99
64. Lan t, Fang Y, Xiong W et al (2007) Automatic baseline correction of infrared spectra. Chin
opt Lett 5:613–616
65. Severcan F, harris PI (2012) vibrational spectroscopy in diagnosis and screening. In: advances in biomedical spectrosocpy, vol. 6. IoS Press
66. Butler WL, hopkins dW (1970) An analysis of fourth derivative spectra. Photochem Photobiol 12:451–456
67. Susi h, Byler dm (1986) Resolution-enhanced Fourier transform infrared spectroscopy of
enzymes. methods Enzymol 130:290–311
68. Savitsky A, golay mJE (1964) Smoothing and differentiation of data by Simplified Least
Squares Procedures. Anal Chem 36:1627–1639
69. van de hulst hC (1981) Light scattering by small particles. dover, New York
70. martens h, Naes t (1989) multivariate Calibration. Wiley, Chichester
71. martens h, Nielsen JP, Engelsen SB (2003) Light scattering and light absorbance separated
by extended multiplicative signal correction. Application to near-infrared transmission analysis of powder mixtures. Anal Chem 75:394–404
72. Chen ZP, morris J, martin E (2006) Extracting chemical information from spectral data with
multiplicative light scattering effects by optical path-length estimation and correction. Anal
Chem 78:7674–7681
73. Kohler A, Sulé-Suso J, Sockalingum gd et al (2008) Estimating and correcting mie scattering in synchrotron-based micorscopic Fourier transform infrared spectra by extended multiplicative signal correction. Appl Spectrosc 62:259–266
74. martens h, Stark E (1991) Extended multiplicative signal correction and spectral interference subtraction: new preprocessing methods for near infrared spectroscopy. J Pharm Biomed
Anal 9:625–635
75. Kohler A, Kirschner C, oust A et al (2005) Extended multiplicative signal correction as a tool
for separation and characterization of physical and chemical information in Fourier transform
infrared microscopy images of cryo-sections of beef loin. Appl Spectrosc 59:707–716
76. Bassan P, Byrne hJ, Bonnier F et al (2009) Resonant mie scattering in infrared spectroscopy
of biological materials-understanding the ‘dispersion artefact’. Analyst 134:1586–1593
77. Bassan P, Kohler A, martens h et al (2010) Resonant mie scattering (Rimes) correction of
infrared spectra from highly scattering biological samples. Analyst 135:268–277
78. Bassan P, Kohler A, martens h et al (2010) Rimes-EmSC correction for infrared spectra of
biological cells: extension using full mie theory and gPu computing. J Biophoton 3:609–
620
79. Bassan P, Byrne hJ, Lee J et al (2009) Reflection contributions to the dispersion artefact in
FtIR spectra of single biological cells. Analyst 134:1171–1175