Parfrey LW, Lahr DJ, Knoll AH, Katz LA (2011) Estimating the timing of early eukaryotic diversification with multigene molecular clocks. Proc Natl
Acad Sci USA 108:13624–13629. https://doi.org/
10.1073/pnas.1110633108
Pejin B, Karaman M (2017) Antitumor natural products
of marine-derived fungi. In: Me ´rillon JM, Ramawat
K (eds) Fungal metabolites. Reference series in
phytochemistry. Springer, Cham, pp 1–28
Pena C, Malm T (2012) VoSeq: a voucher and DNA
sequence web application. PLoS One 7:e39071.
https://doi.org/10.1371/journal.pone.0039071
Pereira RB, Evdokimov NM, Lefranc F, Valentao P,
Kornienko A, Pereira DM, Andrade PB, Gomes A
(2019) Marine-derived anticancer agents: clinical
benefits, innovative mechanisms, and new targets.
Mar Drugs 17:1–21. https://doi.org/10.3390/
md17060329
Pitt JI, Samson RA (2007) Nomenclatural considerations in naming species of Aspergillus and its teleomorphs. Stud Mycol 59:67–70. https://doi.org/
10.3114/sim.2007.59.08
Raghukumar C (2006) Algal-fungal interactions in the
marine ecosystem: symbiosis to parasitism. In:
Tewari A (ed) Recent advances on applied aspects
of Indian marine algae with reference to global
scenario. CSMCRI, Bhavnagar, pp 366–385
Raghukumar C (2008) Marine fungal biotechnology: an
ecological perspective. Fung Div 31:19–35
Raghukumar C, Muraleedharan U, Gaud VR, Mishra R
(2004a) Xylanases of marine fungi of potential use
for biobleaching of paper pulp. J Ind Microbiol
Biotechnol 31:433–441. https://doi.org/10.1007/
s10295-004-0165-2
Raghukumar C, Raghukumar S, Sheelu G, Gupta SM,
Nath BN, Rao BR (2004b) Buried in time: culturable fungi in a deep-sea sediment core from the
Chagos Trench, Indian Ocean. Deep Sea Res Part 1
Oceanogr Res Pap 51:1759–1768. https://doi.org/
10.1016/j.dsr.2004.08.002
Ra ¨ma ¨ T, Norden J, Davey ML, Mathiassen GH, Spatafora JW, Kauserud H (2014) Fungi ahoy! Diversity
on marine wooden substrata in the high North.
Fungal Ecol 8:46–58
Rashmi M, Kushveer JS, Sarma VV (2019) Secondary
metabolites produced by endophytic fungi from
marine environments. In: Jha S (ed) Endophytes
and secondary metabolites. Reference series in
phytochemistry. Springer, Cham, pp 491–526
Rateb ME, Ebel R (2011) Secondary metabolites of fungi
from marine habitats. Nat Prod Rep 28:290–344.
https://doi.org/10.1039/c0np00061b
Redou V, Ciobanu MC, Pachiadaki MG, Edgcomb V,
Alain K, Barbier G, Burgaud G (2014) In-depth
analyses of deep subsurface sediments using 454pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths. FEMS
Microbiol Ecol 90:908–921
Reich M, Labes A (2017) How to boost marine
fungal research: a first step towards a multidisciplinary approach by combining molecular fungal
ecology and natural products chemistry. Mar
Genomics 36:57–75. https://doi.org/10.1016/j.margen.2017.09.007
Richards TA, Jones MD, Leonard G, Bass D (2012)
Marine fungi: their ecology and molecular diversity. Annu Rev Mar Sci 4:495–522. https://doi.org/
10.1146/annurev-marine-120710-100802
Sandri IG, Fontana RC, Barfknecht DM, da Silveira MM
(2011) Clarification of fruit juices by fungal pectinases. LWT Food Sci Technol 44:2217–2222.
https://doi.org/10.1016/j.lwt.2011.02.008
Sarkar S, Pramanik A, Mitra A, Mukherjee J (2010)
Bioprocessing data for the production of marine
enzymes. Mar Drugs 8:1323–1372. https://doi.org/
10.3390/md8041323
Schaumann K, Weide G (1990) Enzymatic degradation
of alginate by marine fungi. Hydrobiologia 204
(205):589–596
Scheu S (2002) The soil food web: structure and perspectives. Eur J Soil Biol 38:11–20. https://doi.org/
10.1016/S1164-5563(01)01117-7
Sikes EL, Uhle ME, Nodder SD, Howard ME (2009)
Sources of organic matter in a coastal marine
environment: evidence from n-alkanes and their
d13C distributions in the Hauraki Gulf, New Zealand. Mar Chem 113:149–163. https://doi.org/
10.1016/j.marchem.2008.12.003
Silber J, Kramer A, Labes A, Tasdemir D (2016) From
discovery to production: biotechnology of marine
fungi for the production of new antibiotics. Mar
Drugs 14:1–20. https://doi.org/10.3390/md14070137
Song F, Ren B, Yu K, Chen C, Guo H, Yang N, Gao H,
Liu X, Liu M, Tong Y, Dai H, Bai H, Wang J,
Zhang L (2012) Quinazolin-4-one coupled with
pyrrolidin-2-iminium alkaloids from marinederived fungus Penicillium aurantiogriseum. Mar
Drugs 10:1297–1306. https://doi.org/10.3390/
md10061297
Stoeck T, Taylor GT, Epstein S (2003) Novel eukaryotes
from the permanently anoxic Cariaco Basin
(Caribbean Sea). Appl Environ Microbiol
69:5656–5663
Synnes M (2007) Bioprospecting of organisms from the
deep sea: scientific and environmental aspects.
Clean Technol Environ Policy 9:53–59
Takami H, Inoue A, Fuji F, Horikoshi K (1997) Microbial flora in the deepest sea mud of the Mariana
Trench. FEMS Microbiol Lett 152:279–285
Thiel V, Neulinger SC, Staufenberger T, Schmaljohann
R, Imhoff JF (2007) Spatial distribution of spongeassociated bacteria in the Mediterranean sponge
Tethya aurantium. FEMS Microbiol Ecol 59:47–63.
https://doi.org/10.1111/j.1574-6941.2006.00217.x
Verma AK, Raghukumar C, Verma P, Shouche YS,
Naik CG (2010) Four marine-derived fungi for
16 Biotechnology of Marine Fungi: New Workhorses and Applications
411
Acad Sci USA 108:13624–13629. https://doi.org/
10.1073/pnas.1110633108
Pejin B, Karaman M (2017) Antitumor natural products
of marine-derived fungi. In: Me ´rillon JM, Ramawat
K (eds) Fungal metabolites. Reference series in
phytochemistry. Springer, Cham, pp 1–28
Pena C, Malm T (2012) VoSeq: a voucher and DNA
sequence web application. PLoS One 7:e39071.
https://doi.org/10.1371/journal.pone.0039071
Pereira RB, Evdokimov NM, Lefranc F, Valentao P,
Kornienko A, Pereira DM, Andrade PB, Gomes A
(2019) Marine-derived anticancer agents: clinical
benefits, innovative mechanisms, and new targets.
Mar Drugs 17:1–21. https://doi.org/10.3390/
md17060329
Pitt JI, Samson RA (2007) Nomenclatural considerations in naming species of Aspergillus and its teleomorphs. Stud Mycol 59:67–70. https://doi.org/
10.3114/sim.2007.59.08
Raghukumar C (2006) Algal-fungal interactions in the
marine ecosystem: symbiosis to parasitism. In:
Tewari A (ed) Recent advances on applied aspects
of Indian marine algae with reference to global
scenario. CSMCRI, Bhavnagar, pp 366–385
Raghukumar C (2008) Marine fungal biotechnology: an
ecological perspective. Fung Div 31:19–35
Raghukumar C, Muraleedharan U, Gaud VR, Mishra R
(2004a) Xylanases of marine fungi of potential use
for biobleaching of paper pulp. J Ind Microbiol
Biotechnol 31:433–441. https://doi.org/10.1007/
s10295-004-0165-2
Raghukumar C, Raghukumar S, Sheelu G, Gupta SM,
Nath BN, Rao BR (2004b) Buried in time: culturable fungi in a deep-sea sediment core from the
Chagos Trench, Indian Ocean. Deep Sea Res Part 1
Oceanogr Res Pap 51:1759–1768. https://doi.org/
10.1016/j.dsr.2004.08.002
Ra ¨ma ¨ T, Norden J, Davey ML, Mathiassen GH, Spatafora JW, Kauserud H (2014) Fungi ahoy! Diversity
on marine wooden substrata in the high North.
Fungal Ecol 8:46–58
Rashmi M, Kushveer JS, Sarma VV (2019) Secondary
metabolites produced by endophytic fungi from
marine environments. In: Jha S (ed) Endophytes
and secondary metabolites. Reference series in
phytochemistry. Springer, Cham, pp 491–526
Rateb ME, Ebel R (2011) Secondary metabolites of fungi
from marine habitats. Nat Prod Rep 28:290–344.
https://doi.org/10.1039/c0np00061b
Redou V, Ciobanu MC, Pachiadaki MG, Edgcomb V,
Alain K, Barbier G, Burgaud G (2014) In-depth
analyses of deep subsurface sediments using 454pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths. FEMS
Microbiol Ecol 90:908–921
Reich M, Labes A (2017) How to boost marine
fungal research: a first step towards a multidisciplinary approach by combining molecular fungal
ecology and natural products chemistry. Mar
Genomics 36:57–75. https://doi.org/10.1016/j.margen.2017.09.007
Richards TA, Jones MD, Leonard G, Bass D (2012)
Marine fungi: their ecology and molecular diversity. Annu Rev Mar Sci 4:495–522. https://doi.org/
10.1146/annurev-marine-120710-100802
Sandri IG, Fontana RC, Barfknecht DM, da Silveira MM
(2011) Clarification of fruit juices by fungal pectinases. LWT Food Sci Technol 44:2217–2222.
https://doi.org/10.1016/j.lwt.2011.02.008
Sarkar S, Pramanik A, Mitra A, Mukherjee J (2010)
Bioprocessing data for the production of marine
enzymes. Mar Drugs 8:1323–1372. https://doi.org/
10.3390/md8041323
Schaumann K, Weide G (1990) Enzymatic degradation
of alginate by marine fungi. Hydrobiologia 204
(205):589–596
Scheu S (2002) The soil food web: structure and perspectives. Eur J Soil Biol 38:11–20. https://doi.org/
10.1016/S1164-5563(01)01117-7
Sikes EL, Uhle ME, Nodder SD, Howard ME (2009)
Sources of organic matter in a coastal marine
environment: evidence from n-alkanes and their
d13C distributions in the Hauraki Gulf, New Zealand. Mar Chem 113:149–163. https://doi.org/
10.1016/j.marchem.2008.12.003
Silber J, Kramer A, Labes A, Tasdemir D (2016) From
discovery to production: biotechnology of marine
fungi for the production of new antibiotics. Mar
Drugs 14:1–20. https://doi.org/10.3390/md14070137
Song F, Ren B, Yu K, Chen C, Guo H, Yang N, Gao H,
Liu X, Liu M, Tong Y, Dai H, Bai H, Wang J,
Zhang L (2012) Quinazolin-4-one coupled with
pyrrolidin-2-iminium alkaloids from marinederived fungus Penicillium aurantiogriseum. Mar
Drugs 10:1297–1306. https://doi.org/10.3390/
md10061297
Stoeck T, Taylor GT, Epstein S (2003) Novel eukaryotes
from the permanently anoxic Cariaco Basin
(Caribbean Sea). Appl Environ Microbiol
69:5656–5663
Synnes M (2007) Bioprospecting of organisms from the
deep sea: scientific and environmental aspects.
Clean Technol Environ Policy 9:53–59
Takami H, Inoue A, Fuji F, Horikoshi K (1997) Microbial flora in the deepest sea mud of the Mariana
Trench. FEMS Microbiol Lett 152:279–285
Thiel V, Neulinger SC, Staufenberger T, Schmaljohann
R, Imhoff JF (2007) Spatial distribution of spongeassociated bacteria in the Mediterranean sponge
Tethya aurantium. FEMS Microbiol Ecol 59:47–63.
https://doi.org/10.1111/j.1574-6941.2006.00217.x
Verma AK, Raghukumar C, Verma P, Shouche YS,
Naik CG (2010) Four marine-derived fungi for
16 Biotechnology of Marine Fungi: New Workhorses and Applications
411