References
Abdel-Hamid AM, Solbiati JO, Cann IKO (2013)
Chapter One—Insights into lignin degradation
and its potential industrial applications. In: Sariaslani S, Gadd GM (eds) Advances in applied
microbiology, vol 82. Academic, San Diego, CA,
pp
1–28.
https://doi.org/10.1016/B978-0-12407679-2.00001-6
Arantes V, Goodell B (2014) Current understanding of
brown-rot fungal biodegradation mechanisms: a
review. In: Deterioration and protection of sustainable biomaterials, vol 1158. ACS symposium
series, vol 1158. American Chemical Society,
Washington, DC, pp 3–21. https://doi.org/
10.1021/bk-2014-1158.ch001
Arantes V, Milagres AMF (2006) Degradation of cellulosic and hemicellulosic substrates using a
chelator-mediated Fenton reaction. J Chem Technol Biotechnol 81(3):413–419. https://doi.org/
10.1002/jctb.1417
Arantes V, Milagres AMF, Filley T, Goodell B (2011)
Lignocellulosic polysaccharides and lignin degradation by wood decay fungi: the relevance of nonenzymatic Fenton-based reactions. J Ind Microbiol
Biotechnol 38(4):541–555. https://doi.org/10.1007/
s10295-10010-10798-10292
Arantes V, Jellison J, Goodell B (2012) Peculiarities of
brown-rot fungi and biochemical Fenton reaction
with regard to their potential as a model for bioprocessing biomass. Appl Microbiol Biotechnol 94
(2):323–338. https://doi.org/10.1007/s00253-0123954-y
Aust SD (1995) Mechanisms of degradation by white
rot fungi. Environ Health Perspect 103(Suppl
5):59–61
Baba Y, Tanabe T, Shirai N, Watanabe T, Honda Y,
Watanabe T (2011) Pretreatment of Japanese
cedar wood by white rot fungi and ethanolysis
for bioethanol production. Biomass Bioenergy
35:320–332.
https://doi.org/10.1016/j.biombioe.2010.08.040
Baldrian P, Valaskova V (2008) Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol
Rev 32(3):501–521. https://doi.org/10.1111/j.15746976.2008.00106.x
Barb WG, Baxendale JH, George P, Hargrave KR (1951)
Reactions of ferrous and ferric ions with hydrogen
peroxide. Part I. The ferrous ion reaction. Faraday
Soc Trans 47:462–500
Barr DP, Aust SD (1994) Mechanisms white rot fungi
use to degrade pollutants. Environ Sci Technol 28
(2):79A–87A
Bissaro B, Va ´rnai A, Røhr A ˚ K, Eijsink VGH (2018)
Oxidoreductases and reactive oxygen species in
conversion of lignocellulosic biomass. Microbiol
Mol Biol Rev 82(4):e00029–e00018. https://doi.
org/10.1128/mmbr.00029-18
Blanchette RA, Burnes TA, Leatham GF, Effland MJ
(1988) Selection of white-rot fungi for biopulping.
Biomass 15(2):93–101. https://doi.org/10.1016/
0144-4565(88)90099-6
Blanchette RA, Held BW, Jurgens JA, McNew DL, Harrington TC, Duncan SM, Farrell RL (2004) Wooddestroying soft rot fungi in the historic expedition
huts of Antarctica. Appl Environ Microbiol 70
(3):1328–1335
Boddy L (2016) Chapter 9—Interactions with humans
and other animals. In: The fungi, 3rd edn. Academic Press, Boston, pp 293–336. https://doi.org/
10.1016/B978-0-12-382034-1.00009-8
Brenelli L, Squina FM, Felby C, Cannella D (2018)
Laccase-derived lignin compounds boost cellulose
oxidative enzymes AA9. Biotechnol Biofuels 11
(1):10. https://doi.org/10.1186/s13068-017-0985-8
Camarero S, Ibarra D, Martı ´nez MJ, Martı ´nez A ´ T (2005)
Lignin-derived compounds as efficient laccase
mediators for decolorization of different types of
recalcitrant dyes. Appl Environ Microbiol 71
(4):1775–1784.
https://doi.org/10.1128/
AEM.71.4.1775-1784.2005
Capolupo L, Faraco V (2016) Green methods of lignocellulose pretreatment for biorefinery development. Appl Microbiol Biotechnol 100(22):9451–
9467. https://doi.org/10.1007/s00253-016-7884-y
Cowling EB (1961) Comparative biochemistry of the
decay of sweetgum sapwood by white-rot and
brown-rot fungi. USDA, Washington, DC
Cowling EB (1964) Microorganisms and microbial
enzyme systems as selective tools in wood anatomy. In: Cote Jr WA (ed) Proceedings, Upper
Saranac Lake, NY, pp 341–368
Cragg SM, Beckham GT, Bruce NC, Bugg TDH, Distel
DL, Dupree P, Etxabe AG, Goodell BS, Jellison J,
McGeehan JE, McQueen-Mason SJ, Schnorr K,
Walton PH, Watts JEM, Zimmer M (2015) Lignocellulose degradation mechanisms across the Tree
of Life. Curr Opin Chem Biol 29:108–119. https://
doi.org/10.1016/j.cbpa.2015.10.018
Daniel G (2003) Microview of wood under degradation
by bacteria and fungi. In: Wood deterioration and
preservation, vol 845. ACS symposium series, vol
845. American Chemical Society, Washington, DC,
pp 34–72. https://doi.org/10.1021/bk-2003-0845.
ch004
Daniel G (2014) Fungal and bacterial biodegradation:
white rots, brown rots, soft rots, and bacteria. In:
Nicholas Darrel D, Goodell B, Schultz Tor P (eds)
Deterioration and protection of sustainable biomaterials. ACS symposium series, vol 1158. American Chemical Society, Washington, DC, pp 23–58.
https://doi.org/10.1021/bk-2014-1158.ch002
Daniel G (2016) Chapter 8—Fungal degradation of
wood cell walls: origins, functions, and applications. In: Kim YS, Funada R, Singh AP (eds) Secondary xylem biology. Academic Press, Boston, pp
392
B. Goodell
Abdel-Hamid AM, Solbiati JO, Cann IKO (2013)
Chapter One—Insights into lignin degradation
and its potential industrial applications. In: Sariaslani S, Gadd GM (eds) Advances in applied
microbiology, vol 82. Academic, San Diego, CA,
pp
1–28.
https://doi.org/10.1016/B978-0-12407679-2.00001-6
Arantes V, Goodell B (2014) Current understanding of
brown-rot fungal biodegradation mechanisms: a
review. In: Deterioration and protection of sustainable biomaterials, vol 1158. ACS symposium
series, vol 1158. American Chemical Society,
Washington, DC, pp 3–21. https://doi.org/
10.1021/bk-2014-1158.ch001
Arantes V, Milagres AMF (2006) Degradation of cellulosic and hemicellulosic substrates using a
chelator-mediated Fenton reaction. J Chem Technol Biotechnol 81(3):413–419. https://doi.org/
10.1002/jctb.1417
Arantes V, Milagres AMF, Filley T, Goodell B (2011)
Lignocellulosic polysaccharides and lignin degradation by wood decay fungi: the relevance of nonenzymatic Fenton-based reactions. J Ind Microbiol
Biotechnol 38(4):541–555. https://doi.org/10.1007/
s10295-10010-10798-10292
Arantes V, Jellison J, Goodell B (2012) Peculiarities of
brown-rot fungi and biochemical Fenton reaction
with regard to their potential as a model for bioprocessing biomass. Appl Microbiol Biotechnol 94
(2):323–338. https://doi.org/10.1007/s00253-0123954-y
Aust SD (1995) Mechanisms of degradation by white
rot fungi. Environ Health Perspect 103(Suppl
5):59–61
Baba Y, Tanabe T, Shirai N, Watanabe T, Honda Y,
Watanabe T (2011) Pretreatment of Japanese
cedar wood by white rot fungi and ethanolysis
for bioethanol production. Biomass Bioenergy
35:320–332.
https://doi.org/10.1016/j.biombioe.2010.08.040
Baldrian P, Valaskova V (2008) Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol
Rev 32(3):501–521. https://doi.org/10.1111/j.15746976.2008.00106.x
Barb WG, Baxendale JH, George P, Hargrave KR (1951)
Reactions of ferrous and ferric ions with hydrogen
peroxide. Part I. The ferrous ion reaction. Faraday
Soc Trans 47:462–500
Barr DP, Aust SD (1994) Mechanisms white rot fungi
use to degrade pollutants. Environ Sci Technol 28
(2):79A–87A
Bissaro B, Va ´rnai A, Røhr A ˚ K, Eijsink VGH (2018)
Oxidoreductases and reactive oxygen species in
conversion of lignocellulosic biomass. Microbiol
Mol Biol Rev 82(4):e00029–e00018. https://doi.
org/10.1128/mmbr.00029-18
Blanchette RA, Burnes TA, Leatham GF, Effland MJ
(1988) Selection of white-rot fungi for biopulping.
Biomass 15(2):93–101. https://doi.org/10.1016/
0144-4565(88)90099-6
Blanchette RA, Held BW, Jurgens JA, McNew DL, Harrington TC, Duncan SM, Farrell RL (2004) Wooddestroying soft rot fungi in the historic expedition
huts of Antarctica. Appl Environ Microbiol 70
(3):1328–1335
Boddy L (2016) Chapter 9—Interactions with humans
and other animals. In: The fungi, 3rd edn. Academic Press, Boston, pp 293–336. https://doi.org/
10.1016/B978-0-12-382034-1.00009-8
Brenelli L, Squina FM, Felby C, Cannella D (2018)
Laccase-derived lignin compounds boost cellulose
oxidative enzymes AA9. Biotechnol Biofuels 11
(1):10. https://doi.org/10.1186/s13068-017-0985-8
Camarero S, Ibarra D, Martı ´nez MJ, Martı ´nez A ´ T (2005)
Lignin-derived compounds as efficient laccase
mediators for decolorization of different types of
recalcitrant dyes. Appl Environ Microbiol 71
(4):1775–1784.
https://doi.org/10.1128/
AEM.71.4.1775-1784.2005
Capolupo L, Faraco V (2016) Green methods of lignocellulose pretreatment for biorefinery development. Appl Microbiol Biotechnol 100(22):9451–
9467. https://doi.org/10.1007/s00253-016-7884-y
Cowling EB (1961) Comparative biochemistry of the
decay of sweetgum sapwood by white-rot and
brown-rot fungi. USDA, Washington, DC
Cowling EB (1964) Microorganisms and microbial
enzyme systems as selective tools in wood anatomy. In: Cote Jr WA (ed) Proceedings, Upper
Saranac Lake, NY, pp 341–368
Cragg SM, Beckham GT, Bruce NC, Bugg TDH, Distel
DL, Dupree P, Etxabe AG, Goodell BS, Jellison J,
McGeehan JE, McQueen-Mason SJ, Schnorr K,
Walton PH, Watts JEM, Zimmer M (2015) Lignocellulose degradation mechanisms across the Tree
of Life. Curr Opin Chem Biol 29:108–119. https://
doi.org/10.1016/j.cbpa.2015.10.018
Daniel G (2003) Microview of wood under degradation
by bacteria and fungi. In: Wood deterioration and
preservation, vol 845. ACS symposium series, vol
845. American Chemical Society, Washington, DC,
pp 34–72. https://doi.org/10.1021/bk-2003-0845.
ch004
Daniel G (2014) Fungal and bacterial biodegradation:
white rots, brown rots, soft rots, and bacteria. In:
Nicholas Darrel D, Goodell B, Schultz Tor P (eds)
Deterioration and protection of sustainable biomaterials. ACS symposium series, vol 1158. American Chemical Society, Washington, DC, pp 23–58.
https://doi.org/10.1021/bk-2014-1158.ch002
Daniel G (2016) Chapter 8—Fungal degradation of
wood cell walls: origins, functions, and applications. In: Kim YS, Funada R, Singh AP (eds) Secondary xylem biology. Academic Press, Boston, pp
392
B. Goodell