Contents
Molecular Genetics
1 Chromatin Structure and Function in Neurospora crassa . . . . . . . . . . . . . .
3
ABIGAIL J. COURTNEY, AILEEN R. FERRARO, ANDREW D. KLOCKO,
ZACHARY A. LEWIS
2 Origin, Function, and Transmission of Accessory Chromosomes . . . . . 25
MICHAEL HABIG, EVA H. STUKENBROCK
3 Genetics of the Unfolded Protein Response in Fungi . . . . . . . . . . . . . . . . . . . 49
REBEKKA HARTING, KAI HEIMEL
4 From Genetics to Molecular Oscillations: The Circadian Clock in
Neurospora crassa . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 77
MEAGHAN S. JANKOWSKI, ZACHARY A. CHASE, JENNIFER M. HURLEY
5 Small RNAs in Fungi . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 105
FRANCISCO E. NICOLA ´ S, LAURA MURCIA, EUSEBIO NAVARRO,
JOSE ´ T. CA ´ NOVAS-MA ´ RQUEZ, VICTORIANO GARRE
6 NLR Function in Fungi as Revealed by the Study of Self/Non-self
Recognition Systems . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123
ASEN DASKALOV, WITOLD DYRKA, SVEN J. SAUPE
7 Genetics and Genomics Decipher Partner Biology in Arbuscular
Mycorrhizas . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 143
LUISA LANFRANCO, GENNARO CAROTENUTO, ANDREA GENRE,
PAOLA BONFANTE
8 Coordination of Fungal Secondary Metabolism and Development . . . . . . 173
JENNIFER GERKE, ANNA M. KO ¨ HLER, CINDY MEISTER, KARL G. THIEME,
HUGO AMOEDO, GERHARD H. BRAUS
9 Fungal Genomics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 207
ROBIN A. OHM
Molecular Genetics
1 Chromatin Structure and Function in Neurospora crassa . . . . . . . . . . . . . .
3
ABIGAIL J. COURTNEY, AILEEN R. FERRARO, ANDREW D. KLOCKO,
ZACHARY A. LEWIS
2 Origin, Function, and Transmission of Accessory Chromosomes . . . . . 25
MICHAEL HABIG, EVA H. STUKENBROCK
3 Genetics of the Unfolded Protein Response in Fungi . . . . . . . . . . . . . . . . . . . 49
REBEKKA HARTING, KAI HEIMEL
4 From Genetics to Molecular Oscillations: The Circadian Clock in
Neurospora crassa . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 77
MEAGHAN S. JANKOWSKI, ZACHARY A. CHASE, JENNIFER M. HURLEY
5 Small RNAs in Fungi . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 105
FRANCISCO E. NICOLA ´ S, LAURA MURCIA, EUSEBIO NAVARRO,
JOSE ´ T. CA ´ NOVAS-MA ´ RQUEZ, VICTORIANO GARRE
6 NLR Function in Fungi as Revealed by the Study of Self/Non-self
Recognition Systems . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123
ASEN DASKALOV, WITOLD DYRKA, SVEN J. SAUPE
7 Genetics and Genomics Decipher Partner Biology in Arbuscular
Mycorrhizas . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 143
LUISA LANFRANCO, GENNARO CAROTENUTO, ANDREA GENRE,
PAOLA BONFANTE
8 Coordination of Fungal Secondary Metabolism and Development . . . . . . 173
JENNIFER GERKE, ANNA M. KO ¨ HLER, CINDY MEISTER, KARL G. THIEME,
HUGO AMOEDO, GERHARD H. BRAUS
9 Fungal Genomics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 207
ROBIN A. OHM