1 3
Topics in Current Chemistry (2018) 376:28
measurements of oxygen photoconsumption. Photochem Photobiol 82(3):733–737. https ://doi.
org/10.1562/2006-01-02-ra-762
15. Shim S-H, Gupta R, Ling YL, Strasfeld DB, Raleigh DP, Zanni MT (2009) Two-dimensional IR
spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific
resolution. Proc Natl Acad Sci USA 106(16):6614–6619. https ://doi.org/10.1073/pnas.08059 57106
16. Alfano RR, Demos SG, Galland P, Gayen SK, Guo Y, Ho PP, Liang X, Liu F, Wang L, Wang QZ,
Wang WB (1998) Time-resolved and nonlinear optical imaging for medical applications. Ann N Y
Acad Sci 838(1):14–28. https ://doi.org/10.1111/j.1749-6632.1998.tb081 84.x
17. Tashiro H, Yajima T (1974) Picosecond absorption spectroscopy of excited-states of dye molecules. Chem Phys Lett 25(4):582–586. https ://doi.org/10.1016/0009-2614(74)85373 -x
18. Shapiro SL, Auston DH (1977) Ultrashort light pulses: picosecond techniques and applications.
Topics in applied physics v 18. Springer, Berlin
19. van Stokkum IHM, Larsen DS, van Grondelle R (2004) Global and target analysis of time-resolved
spectra. Biochim Biophys Acta Bioenerg 1657(2–3):82–104. https ://doi.org/10.1016/j.bbabi
o.2004.04.011
20. Ruckebusch C, Sliwa M, Pernot P, de Juan A, Tauler R (2012) Comprehensive data analysis of
femtosecond transient absorption spectra: a review. J Photochem Photobiol C Photochem Rev
13(1):1–27. https ://doi.org/10.1016/j.jphot ochem rev.2011.10.002
21. Cho MH, Vaswani HM, Brixner T, Stenger J, Fleming GR (2005) Exciton analysis in 2D electronic
spectroscopy. J Phys Chem B 109(21):10542–10556
22. Ginsberg NS, Cheng YC, Fleming GR (2009) Two-dimensional electronic spectroscopy of molecular aggregates. Acc Chem Res 42(9):1352–1363. https ://doi.org/10.1021/ar900 1075
23. Ruetzel S, Diekmann M, Nuernberger P, Walter C, Engels B, Brixner T (2014) Multidimensional
spectroscopy of photoreactivity. Proc Natl Acad Sci 111(13):4764–4769. https ://doi.org/10.1073/
pnas.13237 92111
24. Brixner T, Gerber G (2001) Femtosecond polarization pulse shaping. Opt Lett 26(8):557–559.
https ://doi.org/10.1364/ol.26.00055 7
25. Brixner T, Krampert G, Pfeifer T, Selle R, Gerber G, Wollenhaupt M, Graefe O, Horn C,
Liese D, Baumert T (2004) Quantum control by ultrafast polarization shaping. Phys Rev Lett
92(20):208301. https ://doi.org/10.1103/PhysR evLet t.92.20830 1
26. Strasfeld DB, Middleton CT, Zanni MT (2009) Mode selectivity with polarization shaping in the
mid-IR. New J Phys. https ://doi.org/10.1088/1367-2630/11/10/10504 6
27. Weiner AM (2011) Ultrafast optical pulse shaping: a tutorial review. Opt Commun 284(15):3669–
3692. https ://doi.org/10.1016/j.optco m.2011.03.084
28. Buckup T, Lebold T, Weigel A, Wohlleben W, Motzkus M (2006) Singlet versus triplet dynamics of beta-carotene studied by quantum control spectroscopy. J Photochem Photobiol A
180(3):314–321
29. Tseng CH, Weinacht TC, Rhoades AE, Murray M, Pearson BJ (2011) Using shaped ultrafast
laser pulses to detect enzyme binding. Opt Express 19(24):24638–24646. https ://doi.org/10.1364/
oe.19.02463 8
30. Mohring J, Buckup T, Motzkus M (2012) A quantum control spectroscopy approach by direct
UV femtosecond pulse shaping. IEEE J Sel Top Quantum Electron 18(1):449–459. https ://doi.
org/10.1109/jstqe .2011.21386 84
31. Consani C, Ruetzel S, Nuernberger P, Brixner T (2014) Quantum control spectroscopy of competing reaction pathways in a molecular switch. J Phys Chem A 118(48):11364–11372. https ://doi.
org/10.1021/jp509 382m
32. Nuernberger P, Ruetzel S, Brixner T (2015) Multidimensional electronic spectroscopy of photochemical reactions. Angew Chem Int Ed 54(39):11368–11386. https ://doi.org/10.1002/anie.20150
2974
33. Zanni MT, Ge NH, Kim YS, Hochstrasser RM (2001) Two-dimensional IR spectroscopy can be
designed to eliminate the diagonal peaks and expose only the crosspeaks needed for structure
determination. Proc Natl Acad Sci USA 98(20):11265–11270. https ://doi.org/10.1073/pnas.20141
2998
34. Cervetto V, Helbing J, Bredenbeck J, Hamm P (2004) Double-resonance versus pulsed Fourier
transform two-dimensional infrared spectroscopy: an experimental and theoretical comparison. J
Chem Phys 121(12):5935–5942. https ://doi.org/10.1063/1.17781 63
19
Reprinted from the journal
Topics in Current Chemistry (2018) 376:28
measurements of oxygen photoconsumption. Photochem Photobiol 82(3):733–737. https ://doi.
org/10.1562/2006-01-02-ra-762
15. Shim S-H, Gupta R, Ling YL, Strasfeld DB, Raleigh DP, Zanni MT (2009) Two-dimensional IR
spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific
resolution. Proc Natl Acad Sci USA 106(16):6614–6619. https ://doi.org/10.1073/pnas.08059 57106
16. Alfano RR, Demos SG, Galland P, Gayen SK, Guo Y, Ho PP, Liang X, Liu F, Wang L, Wang QZ,
Wang WB (1998) Time-resolved and nonlinear optical imaging for medical applications. Ann N Y
Acad Sci 838(1):14–28. https ://doi.org/10.1111/j.1749-6632.1998.tb081 84.x
17. Tashiro H, Yajima T (1974) Picosecond absorption spectroscopy of excited-states of dye molecules. Chem Phys Lett 25(4):582–586. https ://doi.org/10.1016/0009-2614(74)85373 -x
18. Shapiro SL, Auston DH (1977) Ultrashort light pulses: picosecond techniques and applications.
Topics in applied physics v 18. Springer, Berlin
19. van Stokkum IHM, Larsen DS, van Grondelle R (2004) Global and target analysis of time-resolved
spectra. Biochim Biophys Acta Bioenerg 1657(2–3):82–104. https ://doi.org/10.1016/j.bbabi
o.2004.04.011
20. Ruckebusch C, Sliwa M, Pernot P, de Juan A, Tauler R (2012) Comprehensive data analysis of
femtosecond transient absorption spectra: a review. J Photochem Photobiol C Photochem Rev
13(1):1–27. https ://doi.org/10.1016/j.jphot ochem rev.2011.10.002
21. Cho MH, Vaswani HM, Brixner T, Stenger J, Fleming GR (2005) Exciton analysis in 2D electronic
spectroscopy. J Phys Chem B 109(21):10542–10556
22. Ginsberg NS, Cheng YC, Fleming GR (2009) Two-dimensional electronic spectroscopy of molecular aggregates. Acc Chem Res 42(9):1352–1363. https ://doi.org/10.1021/ar900 1075
23. Ruetzel S, Diekmann M, Nuernberger P, Walter C, Engels B, Brixner T (2014) Multidimensional
spectroscopy of photoreactivity. Proc Natl Acad Sci 111(13):4764–4769. https ://doi.org/10.1073/
pnas.13237 92111
24. Brixner T, Gerber G (2001) Femtosecond polarization pulse shaping. Opt Lett 26(8):557–559.
https ://doi.org/10.1364/ol.26.00055 7
25. Brixner T, Krampert G, Pfeifer T, Selle R, Gerber G, Wollenhaupt M, Graefe O, Horn C,
Liese D, Baumert T (2004) Quantum control by ultrafast polarization shaping. Phys Rev Lett
92(20):208301. https ://doi.org/10.1103/PhysR evLet t.92.20830 1
26. Strasfeld DB, Middleton CT, Zanni MT (2009) Mode selectivity with polarization shaping in the
mid-IR. New J Phys. https ://doi.org/10.1088/1367-2630/11/10/10504 6
27. Weiner AM (2011) Ultrafast optical pulse shaping: a tutorial review. Opt Commun 284(15):3669–
3692. https ://doi.org/10.1016/j.optco m.2011.03.084
28. Buckup T, Lebold T, Weigel A, Wohlleben W, Motzkus M (2006) Singlet versus triplet dynamics of beta-carotene studied by quantum control spectroscopy. J Photochem Photobiol A
180(3):314–321
29. Tseng CH, Weinacht TC, Rhoades AE, Murray M, Pearson BJ (2011) Using shaped ultrafast
laser pulses to detect enzyme binding. Opt Express 19(24):24638–24646. https ://doi.org/10.1364/
oe.19.02463 8
30. Mohring J, Buckup T, Motzkus M (2012) A quantum control spectroscopy approach by direct
UV femtosecond pulse shaping. IEEE J Sel Top Quantum Electron 18(1):449–459. https ://doi.
org/10.1109/jstqe .2011.21386 84
31. Consani C, Ruetzel S, Nuernberger P, Brixner T (2014) Quantum control spectroscopy of competing reaction pathways in a molecular switch. J Phys Chem A 118(48):11364–11372. https ://doi.
org/10.1021/jp509 382m
32. Nuernberger P, Ruetzel S, Brixner T (2015) Multidimensional electronic spectroscopy of photochemical reactions. Angew Chem Int Ed 54(39):11368–11386. https ://doi.org/10.1002/anie.20150
2974
33. Zanni MT, Ge NH, Kim YS, Hochstrasser RM (2001) Two-dimensional IR spectroscopy can be
designed to eliminate the diagonal peaks and expose only the crosspeaks needed for structure
determination. Proc Natl Acad Sci USA 98(20):11265–11270. https ://doi.org/10.1073/pnas.20141
2998
34. Cervetto V, Helbing J, Bredenbeck J, Hamm P (2004) Double-resonance versus pulsed Fourier
transform two-dimensional infrared spectroscopy: an experimental and theoretical comparison. J
Chem Phys 121(12):5935–5942. https ://doi.org/10.1063/1.17781 63
19
Reprinted from the journal