Popot, J.-L. (2014) Folding membrane proteins in vitro: A table and some comments. Arch. Biochem. Biophys.
564:314–326.
Popot, J.-L., Althoff, T., Bagnard, D., Banères, J.-L., Bazzacco, P., Billon-Denis, E., Catoire, L.J., Champeil, P.,
Charvolin, D., Cocco, M.J., Crémel, G., Dahmane, T., de la Maza, L.M., Ebel, C., Gabel, F., Giusti, F., Gohon,
Y., Goormaghtigh, E., Guittet, E., Kleinschmidt, J.H., Kühlbrandt, W., Le Bon, C., Martinez, K.L., Picard, M., Pucci,
B., Rappaport, F., Sachs, J.N., Tribet, C., van Heijenoort, C., Wien, F., Zito, F., Zoonens, M. (2011) Amphipols from
A to Z. Annu. Rev. Biophys. 40:379–408.
Popot, J.-L., Cartaud, J., Changeux, J.-P. (1981) Reconstitution of a functional acetylcholine receptor: incorporation into
artificial lipid vesicles and pharmacology of the agonist-controlled permeability changes. Eur. J. Biochem.
118:203–214.
Popot, J.-L., Engelman, D.M. (2016) Membranes do not tell proteins how to fold. Biochemistry 55:5–18.
Prince, S.M., Howard, T.D., Myles, D.A., Wilkinson, C., Papiz, M.Z., Freer, A.A., Cogdell, R.J., Isaacs, N. (2003)
Detergent structure in crystals of the integral membrane light-harvesting complex LH2 from Rhodopseudomonas
acidophila strain 10050. J. Mol. Biol. 326:307–315.
Privé, G.G. (2007) Detergents for the stabilization and crystallization of membrane proteins. Methods 41:388–397.
Qin, L., Hiser, C., Mulichak, A., Garavito, R.M., Ferguson-Miller, S. (2006) Identification of conserved lipid/detergentbinding sites in a high-resolution structure of the membrane protein cytochrome c oxidase. Proc. Natl. Acad. Sci. USA
103:16117–16122.
Rodríguez-Ropero, F., Fioroni, M. (2012) Structural and dynamical analysis of an engineered FhuA channel protein
embedded into a lipid bilayer or a detergent belt. J. Struct. Biol. 177:291–301.
Rosenbaum, D.M., Rasmussen, S.G.F., Kobilka, B.K. (2009) The structure and function of G protein-coupled receptors.
Nature 459:356–363.
Rosevear, P., VanAken, T., Baxter, J., Ferguson-Miller, S. (1980) Alkyl glycoside detergents: a simpler synthesis and
their effects on kinetic and physical properties of cytochrome c oxidase. Biochemistry 19:4108–4115.
Roth, M., Arnoux, B., Ducruix, A., Reiss-Husson, F. (1991) Structure of the detergent phase and protein-detergent
interactions in crystals of the wild-type (strain Y) Rhodobacter sphaeroides photochemical reaction center. Biochemistry 30:9403–9413.
Roth, M., Lewitt-Bentley, A., Michel, H., Deisenhofer, J., Huber, R., Oesterhelt, D. (1989) Detergent structure in crystals
of a bacterial photosynthetic reaction center. Nature 340:659–662.
Rouse, S.L., Sansom, M.S.P. (2015) Interactions of lipids and detergents with a viral ion channel protein: Molecular
dynamics simulation studies. J. Phys. Chem. B 119:764–772.
Ruiz, M.B., Prado, A., Goñi, F.M., Alonso, A. (1994) An assessment of the biochemical applications of the non-ionic
surfactant Hecameg. Biochim. Biophys. Acta 1193:301–306.
Sadaf, A., Cho, K.H., Byrne, B., Chae, P.S. (2015) Amphipathic agents for membrane protein study. Meth. Enzymol.
557:57–94.
Sadaf, A., Mortensen, J.S., Capaldi, S., Tikhonova, E., Hariharan, P., Ribeiro, O., Loland, C.J., Guan, L., Byrne, B.,
Chae, P.S. (2016) A class of rigid linker-bearing glucosides for membrane protein structural study. Chem. Sci.
7:1933–1939.
Saif Hasan, S., Yamashita, E., Cramer, W.A. (2013) Transmembrane signaling and assembly of the cytochrome b 6 flipidic charge transfer complex. Biochim. Biophys. Acta 1827:1295–1308.
Salvay, A.G., Santamaria, M., le Maire, M., Ebel, C. (2007) Analytical ultracentrifugation sedimentation velocity for the
characterization of detergent-solubilized membrane proteins Ca
++ -ATPase and ExbB. J. Biol. Phys. 33:399–419.
Sanders II, C.R., Landis, G.C. (1995) Reconstitution of membrane proteins into lipid-rich bilayered mixed micelles for
NMR studies. Biochemistry 34:4030–4040.
Sarkar, C.A., Dodevski, I., Kenig, M., Dudli, S., Mohr, A., Hermans, E., Plückthun, A. (2008) Directed evolution of a G
protein-coupled receptor for expression, stability, and binding selectivity. Proc. Natl. Acad. Sci. USA
105:14808–14813.
Sauer, O., Roth, M., Schirmer, T., Rummel, G., Kratky, C. (2002) Low-resolution detergent tracing in protein crystals
using xenon or krypton to enhance X-ray contrast. Acta Crystallogr. D 58:60–69.
Screpanti, E., Padan, E., Rimon, A., Michel, H., Hunte, C. (2006) Crucial steps in the structure determination of the Na
+ /
H
+ antiporter NhaA in its native conformation. J. Mol. Biol. 362:192–202.
Seddon, A.M., Curnow, P., Booth, P.J. (2004) Membrane proteins, lipids and detergents: not just a soap opera. Biochim.
Biophys. Acta 1666:105–117.
Serrano-Vega, M.J., Magnani, F., Shibata, Y., Tate, C.G. (2008) Conformational thermostabilization of the β 1 -adrenergic
receptor in a detergent-resistant form. Proc. Natl. Acad. Sci. USA 105:877–882.
Shibata, Y., White, J.F., Serrano-Vega, M.J., Magnani, F., Aloia, A.L., Grisshammer, R., Tate, C.G. (2009) Thermostabilization of the neurotensin receptor NTS1. J. Mol. Biol. 390:262–277.
References
93
564:314–326.
Popot, J.-L., Althoff, T., Bagnard, D., Banères, J.-L., Bazzacco, P., Billon-Denis, E., Catoire, L.J., Champeil, P.,
Charvolin, D., Cocco, M.J., Crémel, G., Dahmane, T., de la Maza, L.M., Ebel, C., Gabel, F., Giusti, F., Gohon,
Y., Goormaghtigh, E., Guittet, E., Kleinschmidt, J.H., Kühlbrandt, W., Le Bon, C., Martinez, K.L., Picard, M., Pucci,
B., Rappaport, F., Sachs, J.N., Tribet, C., van Heijenoort, C., Wien, F., Zito, F., Zoonens, M. (2011) Amphipols from
A to Z. Annu. Rev. Biophys. 40:379–408.
Popot, J.-L., Cartaud, J., Changeux, J.-P. (1981) Reconstitution of a functional acetylcholine receptor: incorporation into
artificial lipid vesicles and pharmacology of the agonist-controlled permeability changes. Eur. J. Biochem.
118:203–214.
Popot, J.-L., Engelman, D.M. (2016) Membranes do not tell proteins how to fold. Biochemistry 55:5–18.
Prince, S.M., Howard, T.D., Myles, D.A., Wilkinson, C., Papiz, M.Z., Freer, A.A., Cogdell, R.J., Isaacs, N. (2003)
Detergent structure in crystals of the integral membrane light-harvesting complex LH2 from Rhodopseudomonas
acidophila strain 10050. J. Mol. Biol. 326:307–315.
Privé, G.G. (2007) Detergents for the stabilization and crystallization of membrane proteins. Methods 41:388–397.
Qin, L., Hiser, C., Mulichak, A., Garavito, R.M., Ferguson-Miller, S. (2006) Identification of conserved lipid/detergentbinding sites in a high-resolution structure of the membrane protein cytochrome c oxidase. Proc. Natl. Acad. Sci. USA
103:16117–16122.
Rodríguez-Ropero, F., Fioroni, M. (2012) Structural and dynamical analysis of an engineered FhuA channel protein
embedded into a lipid bilayer or a detergent belt. J. Struct. Biol. 177:291–301.
Rosenbaum, D.M., Rasmussen, S.G.F., Kobilka, B.K. (2009) The structure and function of G protein-coupled receptors.
Nature 459:356–363.
Rosevear, P., VanAken, T., Baxter, J., Ferguson-Miller, S. (1980) Alkyl glycoside detergents: a simpler synthesis and
their effects on kinetic and physical properties of cytochrome c oxidase. Biochemistry 19:4108–4115.
Roth, M., Arnoux, B., Ducruix, A., Reiss-Husson, F. (1991) Structure of the detergent phase and protein-detergent
interactions in crystals of the wild-type (strain Y) Rhodobacter sphaeroides photochemical reaction center. Biochemistry 30:9403–9413.
Roth, M., Lewitt-Bentley, A., Michel, H., Deisenhofer, J., Huber, R., Oesterhelt, D. (1989) Detergent structure in crystals
of a bacterial photosynthetic reaction center. Nature 340:659–662.
Rouse, S.L., Sansom, M.S.P. (2015) Interactions of lipids and detergents with a viral ion channel protein: Molecular
dynamics simulation studies. J. Phys. Chem. B 119:764–772.
Ruiz, M.B., Prado, A., Goñi, F.M., Alonso, A. (1994) An assessment of the biochemical applications of the non-ionic
surfactant Hecameg. Biochim. Biophys. Acta 1193:301–306.
Sadaf, A., Cho, K.H., Byrne, B., Chae, P.S. (2015) Amphipathic agents for membrane protein study. Meth. Enzymol.
557:57–94.
Sadaf, A., Mortensen, J.S., Capaldi, S., Tikhonova, E., Hariharan, P., Ribeiro, O., Loland, C.J., Guan, L., Byrne, B.,
Chae, P.S. (2016) A class of rigid linker-bearing glucosides for membrane protein structural study. Chem. Sci.
7:1933–1939.
Saif Hasan, S., Yamashita, E., Cramer, W.A. (2013) Transmembrane signaling and assembly of the cytochrome b 6 flipidic charge transfer complex. Biochim. Biophys. Acta 1827:1295–1308.
Salvay, A.G., Santamaria, M., le Maire, M., Ebel, C. (2007) Analytical ultracentrifugation sedimentation velocity for the
characterization of detergent-solubilized membrane proteins Ca
++ -ATPase and ExbB. J. Biol. Phys. 33:399–419.
Sanders II, C.R., Landis, G.C. (1995) Reconstitution of membrane proteins into lipid-rich bilayered mixed micelles for
NMR studies. Biochemistry 34:4030–4040.
Sarkar, C.A., Dodevski, I., Kenig, M., Dudli, S., Mohr, A., Hermans, E., Plückthun, A. (2008) Directed evolution of a G
protein-coupled receptor for expression, stability, and binding selectivity. Proc. Natl. Acad. Sci. USA
105:14808–14813.
Sauer, O., Roth, M., Schirmer, T., Rummel, G., Kratky, C. (2002) Low-resolution detergent tracing in protein crystals
using xenon or krypton to enhance X-ray contrast. Acta Crystallogr. D 58:60–69.
Screpanti, E., Padan, E., Rimon, A., Michel, H., Hunte, C. (2006) Crucial steps in the structure determination of the Na
+ /
H
+ antiporter NhaA in its native conformation. J. Mol. Biol. 362:192–202.
Seddon, A.M., Curnow, P., Booth, P.J. (2004) Membrane proteins, lipids and detergents: not just a soap opera. Biochim.
Biophys. Acta 1666:105–117.
Serrano-Vega, M.J., Magnani, F., Shibata, Y., Tate, C.G. (2008) Conformational thermostabilization of the β 1 -adrenergic
receptor in a detergent-resistant form. Proc. Natl. Acad. Sci. USA 105:877–882.
Shibata, Y., White, J.F., Serrano-Vega, M.J., Magnani, F., Aloia, A.L., Grisshammer, R., Tate, C.G. (2009) Thermostabilization of the neurotensin receptor NTS1. J. Mol. Biol. 390:262–277.
References
93