Couturier M, Ladeveze S, Sulzenbacher G, Ciano L, Fanuel M, Moreau C, Villares A, Cathala B,
Chaspoul F, Frandsen KE (2018) Lytic xylan oxidases from wood-decay fungi unlock biomass
degradation. Nat Chem Biol 14(3):306
da Silva MA, Ferraz A (2017) Biological pretreatment of sugarcane bagasse with basidiomycetes
producing varied patterns of biodegradation. Bioresour Technol 225:17–22
Das A, Mondal C, Roy S (2015) Pretreatment methods of ligno-cellulosic biomass: a review. J Eng
Sci Technol Rev 8(5):141–165
Dassa B, Borovok I, Lombard V, Henrissat B, Lamed R, Bayer EA, Moraïs S (2017)
Pan-cellulosomics of mesophilic clostridia: variations on a theme. Microorganisms 5(4):74
Davies G, Henrissat B (1995) Structures and mechanisms of glycosyl hydrolases. Structure 3
(9):853–859
de Barros Ranke FF, Shinya TY, de Figueiredo FC, Núñez EGF, Cabral H, de Oliva Neto P (2020)
Ethanol from rice byproduct using amylases secreted by Rhizopus microsporus var.
oligosporus. Enzyme partial purification and characterization. J Environ Manag 266:110591
de Farias Silva CE, Meneghello D, Bertucco A (2018) A systematic study regarding hydrolysis and
ethanol fermentation from microalgal biomass. Biocatal Agric Biotechnol 14:172–182
De Souza PM (2010) Application of microbial α-amylase in industry-a review. Braz J Microbiol 41
(4):850–861
Decker SR, Sheehan J, Dayton DC, Bozell JJ, Adney WS, Aden A, Hames B, Thomas SR, Bain RL,
Brunecky R (2017) Biomass conversion. In: Handbook of industrial chemistry and biotechnology. Springer, New York, pp 285–419
Demirbas MF (2009) Biorefineries for biofuel upgrading: a critical review. Appl Energy 86:S151–
S161
Dhawan S, Kaur J (2007) Microbial mannanases: an overview of production and applications. Crit
Rev Biotechnol 27(4):197–216
Dodda SR, Sarkar N, Aikat K, Krishnaraj NR, Bhattacharjee S, Bagchi A, Mukhopadhyay SS
(2016) Insights from the molecular dynamics simulation of cellobiohydrolase Cel6A molecular
structural model from Aspergillus fumigatus NITDGPKA3. Comb Chem High Throughput
Screen 19(4):325–333. https://doi.org/10.2174/138620731904160413193236
Doi RH, Kosugi A (2004) Cellulosomes: plant-cell-wall-degrading enzyme complexes. Nat Rev
Microbiol 2(7):541–551
Duan CJ, Xian L, Zhao GC, Feng Y, Pang H, Bai XL, Tang JL, Ma QS, Feng JX (2009) Isolation
and partial characterization of novel genes encoding acidic cellulases from metagenomes of
buffalo rumens. J Appl Microbiol 107(1):245–256
Durre P (2007) Biobutanol: an attractive biofuel. Biotechnol J 2(12):1525–1534. https://doi.org/10.
1002/biot.200700168
Ehimen EA, Holm-Nielsen J-B, Poulsen M, Boelsmand J (2013) Influence of different
pre-treatment routes on the anaerobic digestion of a filamentous algae. Renew Energy
50:476–480
Eibinger M, Ganner T, Bubner P, Rošker S, Kracher D, Haltrich D, Ludwig R, Plank H, Nidetzky B
(2014) Cellulose surface degradation by a lytic polysaccharide monooxygenase and its effect on
cellulase hydrolytic efficiency. J Biol Chem 289(52):35929–35938
Eijsink VG, Petrovic D, Forsberg Z, Mekasha S, Røhr ÅK, Várnai A, Bissaro B, Vaaje-Kolstad G
(2019) On the functional characterization of lytic polysaccharide monooxygenases (LPMOs).
Biotechnol Biofuels 12(1):1–16
Elleuche S, Antranikian G (2013) Starch-hydrolyzing enzymes from thermophiles. In: Thermophilic microbes in environmental and industrial biotechnology. Springer, Dordrecht, pp
509–533
Elleuche S, Schäfers C, Blank S, Schröder C, Antranikian G (2015) Exploration of extremophiles
for high temperature biotechnological processes. Curr Opin Microbiol 25:113–119
Farhangrazi ZS, Copeland BR, Nakayama T, Amachi T, Yamazaki I, Powers L (1994) Oxidationreduction properties of compounds I and II of Arthromyces ramosus peroxidase. Biochemistry
33(18):5647–5652
9 Microbial and Bioinformatics Approach in Biofuel Production
295
Chaspoul F, Frandsen KE (2018) Lytic xylan oxidases from wood-decay fungi unlock biomass
degradation. Nat Chem Biol 14(3):306
da Silva MA, Ferraz A (2017) Biological pretreatment of sugarcane bagasse with basidiomycetes
producing varied patterns of biodegradation. Bioresour Technol 225:17–22
Das A, Mondal C, Roy S (2015) Pretreatment methods of ligno-cellulosic biomass: a review. J Eng
Sci Technol Rev 8(5):141–165
Dassa B, Borovok I, Lombard V, Henrissat B, Lamed R, Bayer EA, Moraïs S (2017)
Pan-cellulosomics of mesophilic clostridia: variations on a theme. Microorganisms 5(4):74
Davies G, Henrissat B (1995) Structures and mechanisms of glycosyl hydrolases. Structure 3
(9):853–859
de Barros Ranke FF, Shinya TY, de Figueiredo FC, Núñez EGF, Cabral H, de Oliva Neto P (2020)
Ethanol from rice byproduct using amylases secreted by Rhizopus microsporus var.
oligosporus. Enzyme partial purification and characterization. J Environ Manag 266:110591
de Farias Silva CE, Meneghello D, Bertucco A (2018) A systematic study regarding hydrolysis and
ethanol fermentation from microalgal biomass. Biocatal Agric Biotechnol 14:172–182
De Souza PM (2010) Application of microbial α-amylase in industry-a review. Braz J Microbiol 41
(4):850–861
Decker SR, Sheehan J, Dayton DC, Bozell JJ, Adney WS, Aden A, Hames B, Thomas SR, Bain RL,
Brunecky R (2017) Biomass conversion. In: Handbook of industrial chemistry and biotechnology. Springer, New York, pp 285–419
Demirbas MF (2009) Biorefineries for biofuel upgrading: a critical review. Appl Energy 86:S151–
S161
Dhawan S, Kaur J (2007) Microbial mannanases: an overview of production and applications. Crit
Rev Biotechnol 27(4):197–216
Dodda SR, Sarkar N, Aikat K, Krishnaraj NR, Bhattacharjee S, Bagchi A, Mukhopadhyay SS
(2016) Insights from the molecular dynamics simulation of cellobiohydrolase Cel6A molecular
structural model from Aspergillus fumigatus NITDGPKA3. Comb Chem High Throughput
Screen 19(4):325–333. https://doi.org/10.2174/138620731904160413193236
Doi RH, Kosugi A (2004) Cellulosomes: plant-cell-wall-degrading enzyme complexes. Nat Rev
Microbiol 2(7):541–551
Duan CJ, Xian L, Zhao GC, Feng Y, Pang H, Bai XL, Tang JL, Ma QS, Feng JX (2009) Isolation
and partial characterization of novel genes encoding acidic cellulases from metagenomes of
buffalo rumens. J Appl Microbiol 107(1):245–256
Durre P (2007) Biobutanol: an attractive biofuel. Biotechnol J 2(12):1525–1534. https://doi.org/10.
1002/biot.200700168
Ehimen EA, Holm-Nielsen J-B, Poulsen M, Boelsmand J (2013) Influence of different
pre-treatment routes on the anaerobic digestion of a filamentous algae. Renew Energy
50:476–480
Eibinger M, Ganner T, Bubner P, Rošker S, Kracher D, Haltrich D, Ludwig R, Plank H, Nidetzky B
(2014) Cellulose surface degradation by a lytic polysaccharide monooxygenase and its effect on
cellulase hydrolytic efficiency. J Biol Chem 289(52):35929–35938
Eijsink VG, Petrovic D, Forsberg Z, Mekasha S, Røhr ÅK, Várnai A, Bissaro B, Vaaje-Kolstad G
(2019) On the functional characterization of lytic polysaccharide monooxygenases (LPMOs).
Biotechnol Biofuels 12(1):1–16
Elleuche S, Antranikian G (2013) Starch-hydrolyzing enzymes from thermophiles. In: Thermophilic microbes in environmental and industrial biotechnology. Springer, Dordrecht, pp
509–533
Elleuche S, Schäfers C, Blank S, Schröder C, Antranikian G (2015) Exploration of extremophiles
for high temperature biotechnological processes. Curr Opin Microbiol 25:113–119
Farhangrazi ZS, Copeland BR, Nakayama T, Amachi T, Yamazaki I, Powers L (1994) Oxidationreduction properties of compounds I and II of Arthromyces ramosus peroxidase. Biochemistry
33(18):5647–5652
9 Microbial and Bioinformatics Approach in Biofuel Production
295