N Fertilization Dependent Bacterial and Archaeal …
79
Table 2 Impact of N fertilization on microbial genera responsible for N transformation in rice
ecosystem
Microbial genera
Role in N
transformation
N fertilization type
Effect on
bacterial
growth
Literature
Bradyrhizobia and
Rhodospirilla
N fixation
Inorganic N
Enriched
growth
[26]
Pseudomonas
Denitrifiaction
Green manure
Enriched
growth
[113]
Bacillus
Denitrifiaction
Organic N
Suppressed
growth
[100]
Burkholderia and
Enterobacter
N fixation
Inorganic N
Suppressed
growth
[56]
Burkholderia,
Bradyrhizobium and
Methylosinus
N fixation
Inorganic N
Suppressed
growth
[41]
Methanogenic archaea N fixation
Inorganic N
Enriched
growth
[41]
Nitrospira
Nitrification
Inorganic N
Suppressed
growth
[60]
Nitrosomonas
Nitrification
Inorganic N
Enriched
growth
[102]
Nitrososphaera and
Nitrospira
Nitrification
Combined organic
and inorganic N
Enriched
growth
[36]
Methanosaeta
Denitrification
Inorganic N
Enriched
growth
[96]
Methylobacter,
Methylomicrobium,
Methylococcus
Denitrification
Inorganic N
Suppressed
growth
[1]
References
1. Alam, M., Jia, Z.: Inhibition of methane oxidation by nitrogenous fertilizers in a paddy soil.
Front. Microbiol. 3 (2012) https://doi.org/10.3389/fmicb.2012.00246
2. Ali, M.A., Lee, C.H., Kim, S.Y., Kim, P.J.: Effect of industrial by-products containing electron
acceptors on mitigating methane emission during rice cultivation. Waste Manage. 29, 2759–
2764 (2009). https://doi.org/10.1016/j.wasman.2009.05.018
3. Atere, C.T., et al.: Rice rhizodeposition and carbon stabilisation in paddy soil are regulated
via drying-rewetting cycles and nitrogen fertilisation. Biol Fert Soils 53, 407–417 (2017).
https://doi.org/10.1007/s00374-017-1190-4
4. Bao, Q., Huang, Y., Wang, F., Nie, S., Nicol, G.W., Yao, H., Ding, L.: Effect of nitrogen
fertilizer and/or rice straw amendment on methanogenic archaeal communities and methane
production from a rice paddy soil. Appl. Microbiol. Biotechnol. 100, 5989–5998 (2016).
https://doi.org/10.1007/s00253-016-7377-z
5. Bei, Z., et al.: Effects of N application strategies on N leaching loss in paddy soil and N use
characteristics in different super hybrid rice cultivars. Paddy Water Environ. (2019). https://
doi.org/10.1007/s10333-019-00762-x
79
Table 2 Impact of N fertilization on microbial genera responsible for N transformation in rice
ecosystem
Microbial genera
Role in N
transformation
N fertilization type
Effect on
bacterial
growth
Literature
Bradyrhizobia and
Rhodospirilla
N fixation
Inorganic N
Enriched
growth
[26]
Pseudomonas
Denitrifiaction
Green manure
Enriched
growth
[113]
Bacillus
Denitrifiaction
Organic N
Suppressed
growth
[100]
Burkholderia and
Enterobacter
N fixation
Inorganic N
Suppressed
growth
[56]
Burkholderia,
Bradyrhizobium and
Methylosinus
N fixation
Inorganic N
Suppressed
growth
[41]
Methanogenic archaea N fixation
Inorganic N
Enriched
growth
[41]
Nitrospira
Nitrification
Inorganic N
Suppressed
growth
[60]
Nitrosomonas
Nitrification
Inorganic N
Enriched
growth
[102]
Nitrososphaera and
Nitrospira
Nitrification
Combined organic
and inorganic N
Enriched
growth
[36]
Methanosaeta
Denitrification
Inorganic N
Enriched
growth
[96]
Methylobacter,
Methylomicrobium,
Methylococcus
Denitrification
Inorganic N
Suppressed
growth
[1]
References
1. Alam, M., Jia, Z.: Inhibition of methane oxidation by nitrogenous fertilizers in a paddy soil.
Front. Microbiol. 3 (2012) https://doi.org/10.3389/fmicb.2012.00246
2. Ali, M.A., Lee, C.H., Kim, S.Y., Kim, P.J.: Effect of industrial by-products containing electron
acceptors on mitigating methane emission during rice cultivation. Waste Manage. 29, 2759–
2764 (2009). https://doi.org/10.1016/j.wasman.2009.05.018
3. Atere, C.T., et al.: Rice rhizodeposition and carbon stabilisation in paddy soil are regulated
via drying-rewetting cycles and nitrogen fertilisation. Biol Fert Soils 53, 407–417 (2017).
https://doi.org/10.1007/s00374-017-1190-4
4. Bao, Q., Huang, Y., Wang, F., Nie, S., Nicol, G.W., Yao, H., Ding, L.: Effect of nitrogen
fertilizer and/or rice straw amendment on methanogenic archaeal communities and methane
production from a rice paddy soil. Appl. Microbiol. Biotechnol. 100, 5989–5998 (2016).
https://doi.org/10.1007/s00253-016-7377-z
5. Bei, Z., et al.: Effects of N application strategies on N leaching loss in paddy soil and N use
characteristics in different super hybrid rice cultivars. Paddy Water Environ. (2019). https://
doi.org/10.1007/s10333-019-00762-x