Wagner, M., Shen, L., Albersmeier, A., van der Kolk, N., Kim, S., Cha,
J., et al. (2018). Sulfolobus acidocaldarius transports pentoses via a
carbohydrate uptake transporter 2 (CUT2)-type ABC transporter
and metabolizes them through the aldolase-independent Weimberg
pathway. Applied and Environmental Microbiology, 84. https://doi.
org/10.1128/AEM.01273-17.
Wahlström, R. M., & Suurnäkki, A. (2015). Enzymatic hydrolysis of
lignocellulosic polysaccharides in the presence of ionic liquids.
Green Chemistry.
Walfridsson, M., Hallborn, J., Penttila, M., Keranen, S., &
Hahn-Hagerdal, B. (1995). Xylose-metabolizing Saccharomyces
cerevisiae strains overexpressing the TKL1 and TAL1 genes
encoding the pentose phosphate pathway enzymes transketolase
and transaldolase. Applied and Environment Microbiology. https://
doi.org/10.1128/aem.61.12.4184-4190.1995.
Wang, T. H., Zhong, Y. H., Huang, W., Liu, T., & You, Y. W. (2005).
Antisense inhibition of xylitol dehydrogenase gene, xdh1 from
Trichoderma reesei. Letters in Applied Microbiology. https://doi.
org/10.1111/j.1472-765X.2005.01685.x.
Wang, J., Jain, R., Shen, X., Sun, X., Cheng, M., Liao, J. C., et al.
(2017). Rational engineering of diol dehydratase enables
1,4-butanediol biosynthesis from xylose. Metabolic Engineering.
https://doi.org/10.1016/j.ymben.2017.02.003.
Wang, T., He, J., & Zhang, Y. (2020). Production of c-valerolactone
from one-pot transformation of biomass-derived carbohydrates over
chitosan-supported ruthenium catalyst combined with zeolite
ZSM-5. European Journal of Organic Chemistry. https://doi.org/
10.1002/ejoc.201901704.
Wefers, D., Dong, J., Abdel-Hamid, A. M., Paul, H. M., Pereira, G. V.,
Han, Y., et al. (2017). Enzymatic mechanism for arabinan
degradation and transport in the thermophilic bacterium caldanaerobius polysaccharolyticus. Applied and Environment Microbiology.
https://doi.org/10.1128/AEM.00794-17.
Wierzbicki, M. P., Maloney, V., Mizrachi, E., & Myburg, A. A. (2019).
Xylan in the middle: Understanding xylan biosynthesis and its
metabolic dependencies toward improving wood fiber for industrial
processing. Frontiers in Plant Science, 10, 1–29. https://doi.org/10.
3389/fpls.2019.00176.
Wikandari, R., Sanjaya, A. P., Millati, R., Karimi, K., & Taherzadeh,
M. J. (2019) Fermentation inhibitors in ethanol and biogas
processes and strategies to counteract their effects. In Biomass,
biofuels, biochemicals: Biofuels: Alternative feedstocks and conversion processes for the production of liquid and gaseous biofuels.
Willför, S., Sundberg, A., Hemming, J., & Holmbom, B. (2005a).
Polysaccharides in some industrially important softwood species.
Wood Science and Technology. https://doi.org/10.1007/s00226004-0280-2.
Willför, S., Sundberg, A., Pranovich, A., & Holmbom, B. (2005b).
Polysaccharides in some industrially important hardwood species.
Wood Science and Technology.
Willför, S., Sundberg, K., Tenkanen, M., & Holmbom, B. (2008).
Spruce-derived mannans-A potential raw material for hydrocolloids
and novel advanced natural materials. Carbohydrate Polymers.
Wyman, C. E., Dale, B. E., Elander, R. T., Holtzapple, M., Ladisch, M.
R., & Lee, Y. Y. (2005). Comparative sugar recovery data from
laboratory scale application of leading pretreatment technologies to
corn stover. Bioresource Technology. https://doi.org/10.1016/j.
biortech.2005.01.018.
Xia, W., Lu, H., Xia, M., Cui, Y., Bai, Y., Qian, L., et al. (2016). A novel
glycoside hydrolase family 113 endo-b-1,4-mannanase from Alicyclobacillus sp. strain A4 and insight into the substrate recognition and
catalytic mechanism of this family. Applied and Environmental
Microbiology. https://doi.org/10.1128/AEM.04071-15.
Xu, Q., Himmel, M. E., & Singh, A. (2015). Production of ethanol from
engineered trichoderma reesei. In Direct microbial conversion of
biomass to advanced biofuels.
Xu, H., Guo, M. Y., Gao, Y. H., Bai, X. H., & Zhou, X. W. (2017).
Expression and characteristics of manganese peroxidase from
Ganoderma lucidum in Pichia pastoris and its application in the
degradation of four dyes and phenol. BMC Biotechnology. https://
doi.org/10.1186/s12896-017-0338-5.
Yang, B., Wyman, C. E. (2008). Pretreatment: The key to unlocking
low-cost cellulosic ethanol. Biofuels, Bioproducts and Biorefining.
Ye, L., Zhou, X., Bin, Hudari M. S., Li, Z., & Wu, J. C. (2013). Highly
efficient production of l-lactic acid from xylose by newly isolated
Bacillus coagulans C106. Bioresource Technology. https://doi.org/
10.1016/j.biortech.2013.01.011.
Yu, S., Jeppsson, H., & Hahn-Hägerdal, B. (1995). Xylulose fermentation by Saccharomyces cerevisiae and xylose-fermenting yeast
strains. Applied Microbiology and Biotechnology. https://doi.org/
10.1007/BF00169922.
Yu, H. T., Chen, B. Y., Li, B. Y., Tseng, M. C., Han, C. C., & Shyu, S.
G. (2018). Efficient pretreatment of lignocellulosic biomass with
high recovery of solid lignin and fermentable sugars using Fenton
reaction in a mixed solvent. Biotechnology for Biofuels. https://doi.
org/10.1186/s13068-018-1288-4.
Zanoelo, F. F., Polizeli, M. D. L. T. D. M., Terenzi, H. F., & Jorge,
J. A. (2004). b-Glucosidase activity from the thermophilic fungus
Scytalidium thermophilum is stimulated by glucose and xylose.
FEMS Microbiology Letters. https://doi.org/10.1016/j.femsle.2004.
09.021.
Zhang, G. C., Liu, J. J., & Ding, W. T. (2012). Decreased xylitol
formation during xylose fermentation in saccharomyces cerevisiae
due to overexpression of water-forming NADH oxidase. Applied
and Environment Microbiology. https://doi.org/10.1128/AEM.
06635-11.
Zhang, N., Wang, J., Zhang, Y., & Gao, H. (2016). Metabolic pathway
optimization for biosynthesis of 1,2,4-butanetriol from xylose by
engineered Escherichia coli. Enyzme and Microbial Technology.
https://doi.org/10.1016/j.enzmictec.2016.07.007.
Zhao, Z., Xian, M., Liu, M., & Zhao, G. (2020). Biochemical routes for
uptake and conversion of xylose by microorganisms. Biotechnology
for Biofuels, 13, 1–12.
Zhu, S., Wu, Y., Chen, Q., Yu, Z., Wang, C., Jin, S., et al. (2006).
Dissolution of cellulose with ionic liquids and its application: A
mini-review. Green Chemistry.
Biomass to Xylose
265
J., et al. (2018). Sulfolobus acidocaldarius transports pentoses via a
carbohydrate uptake transporter 2 (CUT2)-type ABC transporter
and metabolizes them through the aldolase-independent Weimberg
pathway. Applied and Environmental Microbiology, 84. https://doi.
org/10.1128/AEM.01273-17.
Wahlström, R. M., & Suurnäkki, A. (2015). Enzymatic hydrolysis of
lignocellulosic polysaccharides in the presence of ionic liquids.
Green Chemistry.
Walfridsson, M., Hallborn, J., Penttila, M., Keranen, S., &
Hahn-Hagerdal, B. (1995). Xylose-metabolizing Saccharomyces
cerevisiae strains overexpressing the TKL1 and TAL1 genes
encoding the pentose phosphate pathway enzymes transketolase
and transaldolase. Applied and Environment Microbiology. https://
doi.org/10.1128/aem.61.12.4184-4190.1995.
Wang, T. H., Zhong, Y. H., Huang, W., Liu, T., & You, Y. W. (2005).
Antisense inhibition of xylitol dehydrogenase gene, xdh1 from
Trichoderma reesei. Letters in Applied Microbiology. https://doi.
org/10.1111/j.1472-765X.2005.01685.x.
Wang, J., Jain, R., Shen, X., Sun, X., Cheng, M., Liao, J. C., et al.
(2017). Rational engineering of diol dehydratase enables
1,4-butanediol biosynthesis from xylose. Metabolic Engineering.
https://doi.org/10.1016/j.ymben.2017.02.003.
Wang, T., He, J., & Zhang, Y. (2020). Production of c-valerolactone
from one-pot transformation of biomass-derived carbohydrates over
chitosan-supported ruthenium catalyst combined with zeolite
ZSM-5. European Journal of Organic Chemistry. https://doi.org/
10.1002/ejoc.201901704.
Wefers, D., Dong, J., Abdel-Hamid, A. M., Paul, H. M., Pereira, G. V.,
Han, Y., et al. (2017). Enzymatic mechanism for arabinan
degradation and transport in the thermophilic bacterium caldanaerobius polysaccharolyticus. Applied and Environment Microbiology.
https://doi.org/10.1128/AEM.00794-17.
Wierzbicki, M. P., Maloney, V., Mizrachi, E., & Myburg, A. A. (2019).
Xylan in the middle: Understanding xylan biosynthesis and its
metabolic dependencies toward improving wood fiber for industrial
processing. Frontiers in Plant Science, 10, 1–29. https://doi.org/10.
3389/fpls.2019.00176.
Wikandari, R., Sanjaya, A. P., Millati, R., Karimi, K., & Taherzadeh,
M. J. (2019) Fermentation inhibitors in ethanol and biogas
processes and strategies to counteract their effects. In Biomass,
biofuels, biochemicals: Biofuels: Alternative feedstocks and conversion processes for the production of liquid and gaseous biofuels.
Willför, S., Sundberg, A., Hemming, J., & Holmbom, B. (2005a).
Polysaccharides in some industrially important softwood species.
Wood Science and Technology. https://doi.org/10.1007/s00226004-0280-2.
Willför, S., Sundberg, A., Pranovich, A., & Holmbom, B. (2005b).
Polysaccharides in some industrially important hardwood species.
Wood Science and Technology.
Willför, S., Sundberg, K., Tenkanen, M., & Holmbom, B. (2008).
Spruce-derived mannans-A potential raw material for hydrocolloids
and novel advanced natural materials. Carbohydrate Polymers.
Wyman, C. E., Dale, B. E., Elander, R. T., Holtzapple, M., Ladisch, M.
R., & Lee, Y. Y. (2005). Comparative sugar recovery data from
laboratory scale application of leading pretreatment technologies to
corn stover. Bioresource Technology. https://doi.org/10.1016/j.
biortech.2005.01.018.
Xia, W., Lu, H., Xia, M., Cui, Y., Bai, Y., Qian, L., et al. (2016). A novel
glycoside hydrolase family 113 endo-b-1,4-mannanase from Alicyclobacillus sp. strain A4 and insight into the substrate recognition and
catalytic mechanism of this family. Applied and Environmental
Microbiology. https://doi.org/10.1128/AEM.04071-15.
Xu, Q., Himmel, M. E., & Singh, A. (2015). Production of ethanol from
engineered trichoderma reesei. In Direct microbial conversion of
biomass to advanced biofuels.
Xu, H., Guo, M. Y., Gao, Y. H., Bai, X. H., & Zhou, X. W. (2017).
Expression and characteristics of manganese peroxidase from
Ganoderma lucidum in Pichia pastoris and its application in the
degradation of four dyes and phenol. BMC Biotechnology. https://
doi.org/10.1186/s12896-017-0338-5.
Yang, B., Wyman, C. E. (2008). Pretreatment: The key to unlocking
low-cost cellulosic ethanol. Biofuels, Bioproducts and Biorefining.
Ye, L., Zhou, X., Bin, Hudari M. S., Li, Z., & Wu, J. C. (2013). Highly
efficient production of l-lactic acid from xylose by newly isolated
Bacillus coagulans C106. Bioresource Technology. https://doi.org/
10.1016/j.biortech.2013.01.011.
Yu, S., Jeppsson, H., & Hahn-Hägerdal, B. (1995). Xylulose fermentation by Saccharomyces cerevisiae and xylose-fermenting yeast
strains. Applied Microbiology and Biotechnology. https://doi.org/
10.1007/BF00169922.
Yu, H. T., Chen, B. Y., Li, B. Y., Tseng, M. C., Han, C. C., & Shyu, S.
G. (2018). Efficient pretreatment of lignocellulosic biomass with
high recovery of solid lignin and fermentable sugars using Fenton
reaction in a mixed solvent. Biotechnology for Biofuels. https://doi.
org/10.1186/s13068-018-1288-4.
Zanoelo, F. F., Polizeli, M. D. L. T. D. M., Terenzi, H. F., & Jorge,
J. A. (2004). b-Glucosidase activity from the thermophilic fungus
Scytalidium thermophilum is stimulated by glucose and xylose.
FEMS Microbiology Letters. https://doi.org/10.1016/j.femsle.2004.
09.021.
Zhang, G. C., Liu, J. J., & Ding, W. T. (2012). Decreased xylitol
formation during xylose fermentation in saccharomyces cerevisiae
due to overexpression of water-forming NADH oxidase. Applied
and Environment Microbiology. https://doi.org/10.1128/AEM.
06635-11.
Zhang, N., Wang, J., Zhang, Y., & Gao, H. (2016). Metabolic pathway
optimization for biosynthesis of 1,2,4-butanetriol from xylose by
engineered Escherichia coli. Enyzme and Microbial Technology.
https://doi.org/10.1016/j.enzmictec.2016.07.007.
Zhao, Z., Xian, M., Liu, M., & Zhao, G. (2020). Biochemical routes for
uptake and conversion of xylose by microorganisms. Biotechnology
for Biofuels, 13, 1–12.
Zhu, S., Wu, Y., Chen, Q., Yu, Z., Wang, C., Jin, S., et al. (2006).
Dissolution of cellulose with ionic liquids and its application: A
mini-review. Green Chemistry.
Biomass to Xylose
265