Data Structures and Workflows for ICME
51
23. Avizo for Materials Science. (ThermoFisher Scientific) [Online]. Available: https://
instruments-workflow-solutions/3d-visualization-analysis-software/avizo-materialsscience.html. Accessed Mar 2019
24. GeoDict – The Digital Material Laboratory. (Math2Market GmbH) [Online]. Available: https:/
/www.math2market.com/Solutions/aboutGD.php. Accessed Mar 2019
25. ESPRIT QUBE – Advanced 3D analysis of EBSD/EDS Data. (Bruker Corporation) [Online].
Available:
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2019
26. D. Wheeler, D. Brough, T. Fast, S. Kalidindi, A. Reid, PyMKS: Materials Knowledge System
in Python (2014). https://doi.org/10.6084/m9.figshare.1015761
27. S.R. Niezgoda, D.T. Fullwood, S.R. Kalidindi, Delineation of the space of 2-point correlations
in a composite material system. Acta Mater. 56(18), 5285–5292 (2008). https://doi.org/
10.1016/j.actamat.2008.07.005
28. T. Fast, S.R. Kalidindi, Formulation and calibration of higher-order elastic localization
relationships using the MKS approach. Acta Mater. 59(11), 4595–4605 (2011)
29. Magpie. (Wolverton Research Group) [Online]. Available: https://bitbucket.org/wolverton/
magpie. Accessed Mar 2019
30. MTEX Toolbox [Online]. Available: http://mtex-toolbox.github.io/. Accessed Mar 2019
31. F. Bachmann, R. Hielscher, H. Schaeben, Texture analysis with MTEX – Free and open source
software toolbox. Solid State Phenom. 160, 63–68 (2010)
32. J.M. Sosa, D.E. Huber, B. Welk, H.L. Fraser, Development and application of MIPAR: A novel
software package for two- and three-dimensional microstructural characterization. Integr Mater
Manuf Innov 3(10), 123 (2014). https://doi.org/10.1186/2193-9772-3-10
33. M.A. Groeber, M.A. Jackson, DREAM.3D: A digital representation environment for the
analysis of microstructure in 3D. Integr Mater Manuf Innov 3(5), 56 (2014). https://doi.org/
10.1186/2193-9772-3-5
34. ImageJ: Image Processing and Analysis in Java. (National Institutes of Health) [Online].
Available: https://imagej.nih.gov/ij/index.html. Accessed Mar 2019
35. C.A. Schneider, W.S. Rasband, K.W. Eliceri, NIH image to ImageJ: 25 years of image analysis.
Nat. Methods 9, 671–675 (2012). https://doi.org/10.1038/nmeth.2089
36. Fiji [Online]. Available: https://fiji.sc/. Accessed Mar 2019
37. J. Schindelin, I. Arganda-Carreras, E. Frise, V. Kaynig, M. Longair, T. Pietzsch, S. Preibisch,
C. Rueden, S. Saalfeld, B. Schmid, J.-Y. Tinevez, D.J. White, V. Hartenstein, K. Eliceiri,
P. Tomancak, A. Cardona, Fiji: An open-source platform for biological image analysis. Nat.
Methods 9, 676–682 (2012). https://doi.org/10.1038/nmeth.2019
38. ITK. (Kitware, Inc.) [Online]. Available: https://itk.org/. Accessed Mar 2019
39. T.S. Yoo, M.J. Ackerman, W.E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas,
R. Whitaker, Engineering and algorithm design for an image processing Api: A technical report
on ITK – The insight toolkit. Stud. Health Technol. Inform., 586–592 (2002). https://doi.org/
10.3233/978-1-60750-929-5-586.
40. 3D Slicer [Online]. Available: https://www.slicer.org/. Accessed Mar 2019
41. R. Kikinis, S.D. Pieper, K.G. Vosburgh, 3D slicer: A platform for subjet-specific image
analysis, visualization, and clinical support, in Intraoperative Imaging and Image-Guided
Therapy, (2014), pp. 277–289. https://doi.org/10.1007/978-1-4614-7657-3_19
42. VTK (Kitware, Inc.) [Online]. Available: https://vtk.org/. Accessed Mar 2019
43. W. Schroeder, K. Martin, B. Lorensen, The Visualization Toolkit, 4th edn. (Kitware, 2006)
44. SCIRun. (The NIH/NIGMS Center for Integrative Biomedical Computing) [Online]. Available:
http://www.sci.utah.edu/cibc-software/scirun.html. Accessed Mar 2019
45. S.G. Parker, C.R. Johnson, SCIRun: a scientific programming environment for computational
steering, in Proceedings of the 1995 ACM/IEEE Conference on Supercomputing, San Diego,
1995. https://doi.org/10.1109/SUPERC.1995.241689
51
23. Avizo for Materials Science. (ThermoFisher Scientific) [Online]. Available: https://
instruments-workflow-solutions/3d-visualization-analysis-software/avizo-materialsscience.html. Accessed Mar 2019
24. GeoDict – The Digital Material Laboratory. (Math2Market GmbH) [Online]. Available: https:/
/www.math2market.com/Solutions/aboutGD.php. Accessed Mar 2019
25. ESPRIT QUBE – Advanced 3D analysis of EBSD/EDS Data. (Bruker Corporation) [Online].
Available:
https://www.bruker.com/products/x-ray-diffraction-and-elemental-analysis/edswds-ebsd-sem-micro-xrf-and-sem-micro-ct/quantax-ebsd/esprit-qube.html. Accessed Mar
2019
26. D. Wheeler, D. Brough, T. Fast, S. Kalidindi, A. Reid, PyMKS: Materials Knowledge System
in Python (2014). https://doi.org/10.6084/m9.figshare.1015761
27. S.R. Niezgoda, D.T. Fullwood, S.R. Kalidindi, Delineation of the space of 2-point correlations
in a composite material system. Acta Mater. 56(18), 5285–5292 (2008). https://doi.org/
10.1016/j.actamat.2008.07.005
28. T. Fast, S.R. Kalidindi, Formulation and calibration of higher-order elastic localization
relationships using the MKS approach. Acta Mater. 59(11), 4595–4605 (2011)
29. Magpie. (Wolverton Research Group) [Online]. Available: https://bitbucket.org/wolverton/
magpie. Accessed Mar 2019
30. MTEX Toolbox [Online]. Available: http://mtex-toolbox.github.io/. Accessed Mar 2019
31. F. Bachmann, R. Hielscher, H. Schaeben, Texture analysis with MTEX – Free and open source
software toolbox. Solid State Phenom. 160, 63–68 (2010)
32. J.M. Sosa, D.E. Huber, B. Welk, H.L. Fraser, Development and application of MIPAR: A novel
software package for two- and three-dimensional microstructural characterization. Integr Mater
Manuf Innov 3(10), 123 (2014). https://doi.org/10.1186/2193-9772-3-10
33. M.A. Groeber, M.A. Jackson, DREAM.3D: A digital representation environment for the
analysis of microstructure in 3D. Integr Mater Manuf Innov 3(5), 56 (2014). https://doi.org/
10.1186/2193-9772-3-5
34. ImageJ: Image Processing and Analysis in Java. (National Institutes of Health) [Online].
Available: https://imagej.nih.gov/ij/index.html. Accessed Mar 2019
35. C.A. Schneider, W.S. Rasband, K.W. Eliceri, NIH image to ImageJ: 25 years of image analysis.
Nat. Methods 9, 671–675 (2012). https://doi.org/10.1038/nmeth.2089
36. Fiji [Online]. Available: https://fiji.sc/. Accessed Mar 2019
37. J. Schindelin, I. Arganda-Carreras, E. Frise, V. Kaynig, M. Longair, T. Pietzsch, S. Preibisch,
C. Rueden, S. Saalfeld, B. Schmid, J.-Y. Tinevez, D.J. White, V. Hartenstein, K. Eliceiri,
P. Tomancak, A. Cardona, Fiji: An open-source platform for biological image analysis. Nat.
Methods 9, 676–682 (2012). https://doi.org/10.1038/nmeth.2019
38. ITK. (Kitware, Inc.) [Online]. Available: https://itk.org/. Accessed Mar 2019
39. T.S. Yoo, M.J. Ackerman, W.E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas,
R. Whitaker, Engineering and algorithm design for an image processing Api: A technical report
on ITK – The insight toolkit. Stud. Health Technol. Inform., 586–592 (2002). https://doi.org/
10.3233/978-1-60750-929-5-586.
40. 3D Slicer [Online]. Available: https://www.slicer.org/. Accessed Mar 2019
41. R. Kikinis, S.D. Pieper, K.G. Vosburgh, 3D slicer: A platform for subjet-specific image
analysis, visualization, and clinical support, in Intraoperative Imaging and Image-Guided
Therapy, (2014), pp. 277–289. https://doi.org/10.1007/978-1-4614-7657-3_19
42. VTK (Kitware, Inc.) [Online]. Available: https://vtk.org/. Accessed Mar 2019
43. W. Schroeder, K. Martin, B. Lorensen, The Visualization Toolkit, 4th edn. (Kitware, 2006)
44. SCIRun. (The NIH/NIGMS Center for Integrative Biomedical Computing) [Online]. Available:
http://www.sci.utah.edu/cibc-software/scirun.html. Accessed Mar 2019
45. S.G. Parker, C.R. Johnson, SCIRun: a scientific programming environment for computational
steering, in Proceedings of the 1995 ACM/IEEE Conference on Supercomputing, San Diego,
1995. https://doi.org/10.1109/SUPERC.1995.241689