48
Algae
Lukeš, J., Leander, B. S., and Keeling, P. J. Cascades of convergent evolution: The corresponding evolutionary
histories of euglenozoans and dinoflagellates. PNAS, 106: 9963–9970, 2009.
Mackiewicz, P., Bodył, A., and Gagat, P. Protein import into the photosynthetic organelles of Paulinella chromatophora and its implications for primary plastid endosymbiosis. Symbiosis, 58(1–3): 99–107, 2012.
Marin, B. Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae
(Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded
rRNA operons. Protist, 163(5): 778–805, 2012.
Matsumoto, T., Ishikawa, S. A., Hashimoto, T. and Inagaki, Y. A deviant genetic code in the green alga-derived
plastid in the dinoflagellate Lepidodinium chlorophorum. Molecular Phylogenetics and Evolution, 60(1):
68–72, 2011.
Miyagishima, S. Y. Mechanism of plastid division: From a bacterium to an organelle. Plant Physiology, 155(4):
1533–1544, 2011.
Moriya, M., Nakayama, T., and Inouye, I. A new class of the Stramenopiles, Placididea Classis nova: Description
of Placidia cafeteriopsis gen. et sp. nov. Protist, 153(2): 143–156, 2002.
Nishitani, G., Nagai, S., Hayakawa, S., Kosaka, Y., Sakurada, K., Kamiyama, T. et al. Multiple plastids collected by the Dinoflagellate Dinophysis mitra through Kleptoplastidy. Applied and Environmental
Microbiology, 78(3): 813–821, 2012.
Prescott, G. W. Algae of the Western Great Lakes Area. W.C. Brown, Dubuque, IA, 1962.
Qiu, D., Huang, L., Liu, S., and Lin, S. Nuclear, mitochondrial and plastid gene phylogenies of Dinophysis
miles (Dinophyceae): Evidence of variable types of chloroplasts. PLoS ONE, 6(12): e29398, 2011.
Sheiner, L. and Striepen, B. Protein sorting in complex plastids. Biochimica Biophysica Acta, 1833: 352–359,
2013.
Tilden, J. E. The Algae and Their Life Relations. Fundamentals of Phycology. The University of Minnesota
Press, Minneapolis, 1935.
Timme, R. E., Bachvaroff, T. R., and Delwiche, C. F. Broad phylogenomic sampling and the sister lineage of
land plants. PLoS ONE, 27: 1–8, 2012.
Tirichine, L. and Bowler, C. Decoding algal genomes: Tracing back the history of photosynthetic life on Earth.
The Plant Journal, 66: 45–57, 2011.
Van den Hoek, C., Mann, D. G., and Jahns, H. M. Algae—An Introduction to Phycology. Cambridge University
Press, Cambridge, UK, 1995.
Xia, S., Zhang, Q., Zhu, H., Cheng, Y., Liu, G., and Hu, Z. Systematics of a kleptoplastidal dinoflagellate,
Gymnodinium eucyaneum Hu (Dinophyceae), and its cryptomonad endosymbiont. PLoS ONE, 8(1):
e53820, 2013.
Yamaguchi, H., Nakayama, T., Kai, A., and Inouye, I. Taxonomy and phylogeny of a new kleptoplastidal dinoflagellate, Gymnodinium myriopyrenoides sp. nov. (Gymnodiniales, Dinophyceae), and its cryptophyte
symbiont. Protist, 162(4): 650–667, 2011.
Zapata, M., Fraga, S., Rodríguez, F., and Garrido, J. L. Pigment-based chloroplast types in dinoflagellates.
Marine Ecology Progress Series, 465: 33–52, 2012.
Zechman, F. W., Verbruggen, H., Leliaert, F., Ashworth, M., Buchheim, M. A., Fawley, M. W. et al. An unrecognized ancient lineage of green plants persists in deep marine waters. Journal of Phycology, 46: 1288–
1295, 2010.
Algae
Lukeš, J., Leander, B. S., and Keeling, P. J. Cascades of convergent evolution: The corresponding evolutionary
histories of euglenozoans and dinoflagellates. PNAS, 106: 9963–9970, 2009.
Mackiewicz, P., Bodył, A., and Gagat, P. Protein import into the photosynthetic organelles of Paulinella chromatophora and its implications for primary plastid endosymbiosis. Symbiosis, 58(1–3): 99–107, 2012.
Marin, B. Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae
(Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded
rRNA operons. Protist, 163(5): 778–805, 2012.
Matsumoto, T., Ishikawa, S. A., Hashimoto, T. and Inagaki, Y. A deviant genetic code in the green alga-derived
plastid in the dinoflagellate Lepidodinium chlorophorum. Molecular Phylogenetics and Evolution, 60(1):
68–72, 2011.
Miyagishima, S. Y. Mechanism of plastid division: From a bacterium to an organelle. Plant Physiology, 155(4):
1533–1544, 2011.
Moriya, M., Nakayama, T., and Inouye, I. A new class of the Stramenopiles, Placididea Classis nova: Description
of Placidia cafeteriopsis gen. et sp. nov. Protist, 153(2): 143–156, 2002.
Nishitani, G., Nagai, S., Hayakawa, S., Kosaka, Y., Sakurada, K., Kamiyama, T. et al. Multiple plastids collected by the Dinoflagellate Dinophysis mitra through Kleptoplastidy. Applied and Environmental
Microbiology, 78(3): 813–821, 2012.
Prescott, G. W. Algae of the Western Great Lakes Area. W.C. Brown, Dubuque, IA, 1962.
Qiu, D., Huang, L., Liu, S., and Lin, S. Nuclear, mitochondrial and plastid gene phylogenies of Dinophysis
miles (Dinophyceae): Evidence of variable types of chloroplasts. PLoS ONE, 6(12): e29398, 2011.
Sheiner, L. and Striepen, B. Protein sorting in complex plastids. Biochimica Biophysica Acta, 1833: 352–359,
2013.
Tilden, J. E. The Algae and Their Life Relations. Fundamentals of Phycology. The University of Minnesota
Press, Minneapolis, 1935.
Timme, R. E., Bachvaroff, T. R., and Delwiche, C. F. Broad phylogenomic sampling and the sister lineage of
land plants. PLoS ONE, 27: 1–8, 2012.
Tirichine, L. and Bowler, C. Decoding algal genomes: Tracing back the history of photosynthetic life on Earth.
The Plant Journal, 66: 45–57, 2011.
Van den Hoek, C., Mann, D. G., and Jahns, H. M. Algae—An Introduction to Phycology. Cambridge University
Press, Cambridge, UK, 1995.
Xia, S., Zhang, Q., Zhu, H., Cheng, Y., Liu, G., and Hu, Z. Systematics of a kleptoplastidal dinoflagellate,
Gymnodinium eucyaneum Hu (Dinophyceae), and its cryptomonad endosymbiont. PLoS ONE, 8(1):
e53820, 2013.
Yamaguchi, H., Nakayama, T., Kai, A., and Inouye, I. Taxonomy and phylogeny of a new kleptoplastidal dinoflagellate, Gymnodinium myriopyrenoides sp. nov. (Gymnodiniales, Dinophyceae), and its cryptophyte
symbiont. Protist, 162(4): 650–667, 2011.
Zapata, M., Fraga, S., Rodríguez, F., and Garrido, J. L. Pigment-based chloroplast types in dinoflagellates.
Marine Ecology Progress Series, 465: 33–52, 2012.
Zechman, F. W., Verbruggen, H., Leliaert, F., Ashworth, M., Buchheim, M. A., Fawley, M. W. et al. An unrecognized ancient lineage of green plants persists in deep marine waters. Journal of Phycology, 46: 1288–
1295, 2010.