Dynes JJ, Tyliszczak T, Araki T et al (2006a) Speciation and quantitative mapping of metal species
in microbial biofilms using scanning transmission X-ray microscopy. Environ Sci Technol
40:1556–1565. https://doi.org/10.1021/es0513638
Dynes JJ, Lawrence JR, Korber DR et al (2006b) Quantitative mapping of chlorhexidine in natural
river biofilms. Sci Total Environ 369:369–383. https://doi.org/10.1016/j.scitotenv.2006.04.033
Edwards SJ, Kjellerup BV (2013) Applications of biofilms in bioremediation and biotransformation
of persistent organic pollutants, pharmaceuticals/personal care products, and heavy metals. Appl
Microbiol Biotechnol 97:9909–9921. https://doi.org/10.1007/s00253-013-5216-z
European Commission (2010) Common Implementation Strategy for the Water Framework Directive (2000/60/EC): Guidance Document No. 25 on chemical monitoring of sediment and biota
under the Water Framework Directive
European Commission (2013) Directive 2013/39/EU of the European Parliament and of the Council
of 12 August 2013 amending Directives 2000/60/EC and 2008/105/EC as regards priority
substances in the field of water policy. Off J L 226
European Commission (2015) Commission Implementing Decision 2015/495 of 20 March 2015
establishing a watch list of substances for union-wide monitoring in the field of water policy
pursuant to Directive 2008/105/EC of the European Parliament and of the Council (notified
under document C(2015) 1756) text with EEA relevance. Off J L 78
Fabure J, Dufour M, Autret A et al (2015) Impact of an urban multi-metal contamination gradient:
metal bioaccumulation and tolerance of river biofilms collected in different seasons. Aquat
Toxicol 159:276–289. https://doi.org/10.1016/j.aquatox.2014.12.014
Fan Q, He J, Xue H et al (2007) Competitive adsorption, release and speciation of heavy metals in
the Yellow River sediments, China. Environ Geol 53:239–251. https://doi.org/10.1007/s00254007-0638-5
Farag AM, Woodward DF, Goldstein JN et al (1998) Concentrations of metals associated with
mining waste in sediments, biofilm, benthic macroinvertebrates, and fish from the Coeur
d’Alene River Basin, Idaho. Arch Environ Contam Toxicol 34:119–127
Farag AM, Nimick DA, Kimball BA et al (2007) Concentrations of metals in water, sediment,
biofilm, benthic macroinvertebrates, and fish in the Boulder River watershed, Montana, and the
role of colloids in metal uptake. Arch Environ Contam Toxicol 52:397–409. https://doi.org/10.
1007/s00244-005-0021-z
Fechner LC, Gourlay-France C, Tusseau-Vuillemin M-H (2011) Low exposure levels of urban
metals induce heterotrophic community tolerance: a microcosm validation. Ecotoxicology
20:793–802. https://doi.org/10.1007/s10646-011-0630-4
Fechner LC, Gourlay-France C, Bourgeault A, Tusseau-Vuillemin M-H (2012) Diffuse urban
pollution increases metal tolerance of natural heterotrophic biofilms. Environ Pollut
162:311–318. https://doi.org/10.1016/j.envpol.2011.11.033
Fent K, Weston AA, Caminada D (2006) Ecotoxicology of human pharmaceuticals. Aquat Toxicol
76:122–159. https://doi.org/10.1016/j.aquatox.2005.09.009
Fernandez MA, Alonso C, Gonzalez MJ, Hernandez LM (1999) Occurrence of organochlorine
insecticides, PCBs and PCB congeners in waters and sediments of the Ebro River (Spain).
Chemosphere 38:33–43. https://doi.org/10.1016/s0045-6535(98)00167-2
Fisk AT, Hobson KA, Norstrom RJ (2001) Influence of chemical and biological factors on trophic
transfer of persistent organic pollutants in the Northwater Polynya Marine Food Web. Environ
Sci Technol 35:732–738. https://doi.org/10.1021/es001459w
Flemming HC (1995) Sorption sites in biofilms. Water Sci Technol 32:27–33. https://doi.org/10.
1016/0273-1223(96)00004-2
Flemming H-C, Wingender J (2001) Relevance of microbial extracellular polymeric substances
(EPSs) – part I: structural and ecological aspects. Water Sci Technol 43:1–8
Flemming HC, Neu TR, Wozniak DJ (2007) The EPS matrix: the “house of biofilm cells”.
J Bacteriol 189:7945–7947. https://doi.org/10.1128/JB.00858-07
Friesen V, Doig LE, Markwart BE et al (2017) Genetic characterization of periphyton communities
associated with selenium bioconcentration and trophic transfer in a simple food chain. Environ
Sci Technol 51:7532–7541. https://doi.org/10.1021/acs.est.7b01001
146
C. Bonnineau et al.
in microbial biofilms using scanning transmission X-ray microscopy. Environ Sci Technol
40:1556–1565. https://doi.org/10.1021/es0513638
Dynes JJ, Lawrence JR, Korber DR et al (2006b) Quantitative mapping of chlorhexidine in natural
river biofilms. Sci Total Environ 369:369–383. https://doi.org/10.1016/j.scitotenv.2006.04.033
Edwards SJ, Kjellerup BV (2013) Applications of biofilms in bioremediation and biotransformation
of persistent organic pollutants, pharmaceuticals/personal care products, and heavy metals. Appl
Microbiol Biotechnol 97:9909–9921. https://doi.org/10.1007/s00253-013-5216-z
European Commission (2010) Common Implementation Strategy for the Water Framework Directive (2000/60/EC): Guidance Document No. 25 on chemical monitoring of sediment and biota
under the Water Framework Directive
European Commission (2013) Directive 2013/39/EU of the European Parliament and of the Council
of 12 August 2013 amending Directives 2000/60/EC and 2008/105/EC as regards priority
substances in the field of water policy. Off J L 226
European Commission (2015) Commission Implementing Decision 2015/495 of 20 March 2015
establishing a watch list of substances for union-wide monitoring in the field of water policy
pursuant to Directive 2008/105/EC of the European Parliament and of the Council (notified
under document C(2015) 1756) text with EEA relevance. Off J L 78
Fabure J, Dufour M, Autret A et al (2015) Impact of an urban multi-metal contamination gradient:
metal bioaccumulation and tolerance of river biofilms collected in different seasons. Aquat
Toxicol 159:276–289. https://doi.org/10.1016/j.aquatox.2014.12.014
Fan Q, He J, Xue H et al (2007) Competitive adsorption, release and speciation of heavy metals in
the Yellow River sediments, China. Environ Geol 53:239–251. https://doi.org/10.1007/s00254007-0638-5
Farag AM, Woodward DF, Goldstein JN et al (1998) Concentrations of metals associated with
mining waste in sediments, biofilm, benthic macroinvertebrates, and fish from the Coeur
d’Alene River Basin, Idaho. Arch Environ Contam Toxicol 34:119–127
Farag AM, Nimick DA, Kimball BA et al (2007) Concentrations of metals in water, sediment,
biofilm, benthic macroinvertebrates, and fish in the Boulder River watershed, Montana, and the
role of colloids in metal uptake. Arch Environ Contam Toxicol 52:397–409. https://doi.org/10.
1007/s00244-005-0021-z
Fechner LC, Gourlay-France C, Tusseau-Vuillemin M-H (2011) Low exposure levels of urban
metals induce heterotrophic community tolerance: a microcosm validation. Ecotoxicology
20:793–802. https://doi.org/10.1007/s10646-011-0630-4
Fechner LC, Gourlay-France C, Bourgeault A, Tusseau-Vuillemin M-H (2012) Diffuse urban
pollution increases metal tolerance of natural heterotrophic biofilms. Environ Pollut
162:311–318. https://doi.org/10.1016/j.envpol.2011.11.033
Fent K, Weston AA, Caminada D (2006) Ecotoxicology of human pharmaceuticals. Aquat Toxicol
76:122–159. https://doi.org/10.1016/j.aquatox.2005.09.009
Fernandez MA, Alonso C, Gonzalez MJ, Hernandez LM (1999) Occurrence of organochlorine
insecticides, PCBs and PCB congeners in waters and sediments of the Ebro River (Spain).
Chemosphere 38:33–43. https://doi.org/10.1016/s0045-6535(98)00167-2
Fisk AT, Hobson KA, Norstrom RJ (2001) Influence of chemical and biological factors on trophic
transfer of persistent organic pollutants in the Northwater Polynya Marine Food Web. Environ
Sci Technol 35:732–738. https://doi.org/10.1021/es001459w
Flemming HC (1995) Sorption sites in biofilms. Water Sci Technol 32:27–33. https://doi.org/10.
1016/0273-1223(96)00004-2
Flemming H-C, Wingender J (2001) Relevance of microbial extracellular polymeric substances
(EPSs) – part I: structural and ecological aspects. Water Sci Technol 43:1–8
Flemming HC, Neu TR, Wozniak DJ (2007) The EPS matrix: the “house of biofilm cells”.
J Bacteriol 189:7945–7947. https://doi.org/10.1128/JB.00858-07
Friesen V, Doig LE, Markwart BE et al (2017) Genetic characterization of periphyton communities
associated with selenium bioconcentration and trophic transfer in a simple food chain. Environ
Sci Technol 51:7532–7541. https://doi.org/10.1021/acs.est.7b01001
146
C. Bonnineau et al.