12 Intra-operative Measurement of Brain Deformation
317
50. Sastry, R., Bi, W.L., Pieper, S., Frisken, S., Kapur, T., Wells 3rd, W., Golby, A.J.: Applications
of ultrasound in the resection of brain tumors. J. Neuroimaging. 27(1), 5–15 (2017)
51. SINTEF: Ultrasound in Neurosurgery. https://www.sintef.no/en/events/ultrasound-inneurosurgery/
52. Hata, N., Nabavi, A., Wells 3rd, W.M., Warfield, S.K., Kikinis, R., Black, P.M., Jolesz, F.A.:
Three-dimensional optical flow method for measurement of volumetric brain deformation from
intraoperative MR images. J. Comput. Assist. Tomogr. 24(4), 531–538 (2000)
53. Archip, N., Clatz, O., Whalen, S., Kacher, D., Fedorov, A., Kot, A., Chrisochoides, N., Jolesz,
F., Golby, A., Black, P.M., Warfield, S.K.: Non-rigid alignment of pre-operative MRI, fMRI,
and DT-MRI with intra-operative MRI for enhanced visualization and navigation in imageguided neurosurgery. NeuroImage. 35(2), 609–624 (2007)
54. Drakopoulos, F., Chrisochoides, N.P.: Accurate and fast deformable medical image registration
for brain tumor resection using image-guided neurosurgery. Comput. Methods Biomech.
Biomed. Eng. Imaging Vis. 4(2), 112–126 (2016)
55. Comeau, R.M., Sadikot, A.F., Fenster, A., Peters, T.M.: Intraoperative ultrasound for guidance
and tissue shift correction in image-guided neurosurgery. Med. Phys. 27(4), 787–800 (2000)
56. Bonsanto, M.M., Staubert, A., Wirtz, C.R., Tronnier, V., Kunze, S.: Initial experience with an
ultrasound-integrated single-RACK neuronavigation system. Acta Neurochir. 143(11), 1127–
1132 (2001)
57. Lunn, K.E., Paulsen, K.D., Roberts, D.W., Kennedy, F.E., Hartov, A., West, J.D.: Displacement
estimation with co-registered ultrasound for image guided neurosurgery: a quantitative in vivo
porcine study. IEEE Trans. Med. Imaging. 22(11), 1358–1368 (2003)
58. Chacko, A.G., Kumar, N.K., Chacko, G., Athyal, R., Rajshekhar, V.: Intraoperative ultrasound
in determining the extent of resection of parenchymal brain tumours–a comparative study with
computed tomography and histopathology. Acta Neurochir. 145(9), 743–748; discussion 748
(2003)
59. Ji, S., Wu, Z., Hartov, A., Roberts, D.W., Paulsen, K.D.: Mutual-information-based image
to patient re-registration using intraoperative ultrasound in image-guided neurosurgery. Med.
Phys. 35(10), 4612–4624 (2008)
60. Rivaz, H., Collins, D.L.: Deformable registration of preoperative MR, pre-resection ultrasound,
and post-resection ultrasound images of neurosurgery. Int. J. Comput. Assist. Radiol. Surg.
10(7), 1017–1028 (2015)
61. Wein, W., Ladikos, A., Fuerst, B., Shah, A., Sharma, K., Navab, N.: Global registration of
ultrasound to MRI using the LC2 metric for enabling neurosurgical guidance. Med. Image
Comput. Comput. Assist. Interv. 16(Pt 1), 34–41 (2013)
62. Fuerst, B., Wein, W., Muller, M., Navab, N.: Automatic ultrasound-MRI registration for
neurosurgery using the 2D and 3D LC(2) Metric. Med. Image Anal. 18(8), 1312–1319 (2014)
63. Miga, M.I., Sinha, T.K., Cash, D.M., Galloway, R.L., Weil, R.J.: Cortical surface registration
for image-guided neurosurgery using laser-range scanning. IEEE Trans. Med. Imaging. 22(8),
973–985 (2003)
64. Sinha, T.K., Dawant, B.M., Duay, V., Cash, D.M., Weil, R.J., Thompson, R.C., Weaver, K.D.,
Miga, M.I.: A method to track cortical surface deformations using a laser range scanner. IEEE
Trans. Med. Imaging. 24(6), 767–781 (2005)
65. Ji, S., Fan, X., Roberts, D.W., Hartov, A., Paulsen, K.D.: Cortical surface shift estimation using
stereovision and optical flow motion tracking via projection image registration. Med. Image
Anal. 18(7), 1169–1183 (2014)
66. Warfield, S.K., Haker, S.J., Talos, I.F., Kemper, C.A., Weisenfeld, N., Mewes, A.U., GoldbergZimring, D., Zou, K.H., Westin, C.F., Wells, W.M., Tempany, C.M., Golby, A., Black,
P.M., Jolesz, F.A., Kikinis, R.: Capturing intraoperative deformations: research experience at
Brigham and Women’s Hospital. Med. Image Anal. 9(2), 145–162 (2005)
67. Kacher, D.F., Whalen, B., Handa, A., Jolesz, F.A.: The advanced multimodality image-guided
operating (AMIGO) suite. In: Jolesz, F.A. (ed.) Intraoperative imaging and image-guided
therapy. Springer, New York (2014)
317
50. Sastry, R., Bi, W.L., Pieper, S., Frisken, S., Kapur, T., Wells 3rd, W., Golby, A.J.: Applications
of ultrasound in the resection of brain tumors. J. Neuroimaging. 27(1), 5–15 (2017)
51. SINTEF: Ultrasound in Neurosurgery. https://www.sintef.no/en/events/ultrasound-inneurosurgery/
52. Hata, N., Nabavi, A., Wells 3rd, W.M., Warfield, S.K., Kikinis, R., Black, P.M., Jolesz, F.A.:
Three-dimensional optical flow method for measurement of volumetric brain deformation from
intraoperative MR images. J. Comput. Assist. Tomogr. 24(4), 531–538 (2000)
53. Archip, N., Clatz, O., Whalen, S., Kacher, D., Fedorov, A., Kot, A., Chrisochoides, N., Jolesz,
F., Golby, A., Black, P.M., Warfield, S.K.: Non-rigid alignment of pre-operative MRI, fMRI,
and DT-MRI with intra-operative MRI for enhanced visualization and navigation in imageguided neurosurgery. NeuroImage. 35(2), 609–624 (2007)
54. Drakopoulos, F., Chrisochoides, N.P.: Accurate and fast deformable medical image registration
for brain tumor resection using image-guided neurosurgery. Comput. Methods Biomech.
Biomed. Eng. Imaging Vis. 4(2), 112–126 (2016)
55. Comeau, R.M., Sadikot, A.F., Fenster, A., Peters, T.M.: Intraoperative ultrasound for guidance
and tissue shift correction in image-guided neurosurgery. Med. Phys. 27(4), 787–800 (2000)
56. Bonsanto, M.M., Staubert, A., Wirtz, C.R., Tronnier, V., Kunze, S.: Initial experience with an
ultrasound-integrated single-RACK neuronavigation system. Acta Neurochir. 143(11), 1127–
1132 (2001)
57. Lunn, K.E., Paulsen, K.D., Roberts, D.W., Kennedy, F.E., Hartov, A., West, J.D.: Displacement
estimation with co-registered ultrasound for image guided neurosurgery: a quantitative in vivo
porcine study. IEEE Trans. Med. Imaging. 22(11), 1358–1368 (2003)
58. Chacko, A.G., Kumar, N.K., Chacko, G., Athyal, R., Rajshekhar, V.: Intraoperative ultrasound
in determining the extent of resection of parenchymal brain tumours–a comparative study with
computed tomography and histopathology. Acta Neurochir. 145(9), 743–748; discussion 748
(2003)
59. Ji, S., Wu, Z., Hartov, A., Roberts, D.W., Paulsen, K.D.: Mutual-information-based image
to patient re-registration using intraoperative ultrasound in image-guided neurosurgery. Med.
Phys. 35(10), 4612–4624 (2008)
60. Rivaz, H., Collins, D.L.: Deformable registration of preoperative MR, pre-resection ultrasound,
and post-resection ultrasound images of neurosurgery. Int. J. Comput. Assist. Radiol. Surg.
10(7), 1017–1028 (2015)
61. Wein, W., Ladikos, A., Fuerst, B., Shah, A., Sharma, K., Navab, N.: Global registration of
ultrasound to MRI using the LC2 metric for enabling neurosurgical guidance. Med. Image
Comput. Comput. Assist. Interv. 16(Pt 1), 34–41 (2013)
62. Fuerst, B., Wein, W., Muller, M., Navab, N.: Automatic ultrasound-MRI registration for
neurosurgery using the 2D and 3D LC(2) Metric. Med. Image Anal. 18(8), 1312–1319 (2014)
63. Miga, M.I., Sinha, T.K., Cash, D.M., Galloway, R.L., Weil, R.J.: Cortical surface registration
for image-guided neurosurgery using laser-range scanning. IEEE Trans. Med. Imaging. 22(8),
973–985 (2003)
64. Sinha, T.K., Dawant, B.M., Duay, V., Cash, D.M., Weil, R.J., Thompson, R.C., Weaver, K.D.,
Miga, M.I.: A method to track cortical surface deformations using a laser range scanner. IEEE
Trans. Med. Imaging. 24(6), 767–781 (2005)
65. Ji, S., Fan, X., Roberts, D.W., Hartov, A., Paulsen, K.D.: Cortical surface shift estimation using
stereovision and optical flow motion tracking via projection image registration. Med. Image
Anal. 18(7), 1169–1183 (2014)
66. Warfield, S.K., Haker, S.J., Talos, I.F., Kemper, C.A., Weisenfeld, N., Mewes, A.U., GoldbergZimring, D., Zou, K.H., Westin, C.F., Wells, W.M., Tempany, C.M., Golby, A., Black,
P.M., Jolesz, F.A., Kikinis, R.: Capturing intraoperative deformations: research experience at
Brigham and Women’s Hospital. Med. Image Anal. 9(2), 145–162 (2005)
67. Kacher, D.F., Whalen, B., Handa, A., Jolesz, F.A.: The advanced multimodality image-guided
operating (AMIGO) suite. In: Jolesz, F.A. (ed.) Intraoperative imaging and image-guided
therapy. Springer, New York (2014)