Table 3
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Brassica nigra
• 758 Mb
• black
mustard
• n
¼ 8
• DC
•
Brassicaceae
• I
402,145 47,527
2,545
39,062
21,385
38
GCA_001682895.1
Oryza nivara
• 455 Mb
• Indian
wild rice
• n
¼ 12
• MC
•
Poaceae
• I
337,950 27,953
12
28,646
16,484
38
GCA_000576065.1
Cicer arietinum
• 929 Mb
• chickpea
• n
¼ 8
• DC
• Leguminosae
• I
530,894 48,145
7,545
698
39,024
34 27,650
e
GCF_000331145.1
• Varshney
et al. (2013)
Ziziphus jujuba
• 444 Mb
s
• common jujube
• n
¼ 12
s
• DC
•
Rhamnaceae
• I
437,754 20,440
5,897
301
28,947
34 33,079
e
GCF_000826755.1
• Liu et al.
(2014)
Camelina sativa
• 750 Mb
t
• false
flax • n
¼ 20
t
• DC
•
Brassicaceae
• I4
641,356 45,010
37,212
30,100
72,248
33 97,832
e
GCF_000633955.1
• Kagale et al.
(2014)
Prunus mume
• 280 Mb
s
• Japanese
apricot
• n
¼ 8
s
• DC
• Rosaceae
• I
234,030 16,851
8,626
637
23,761
32 23,553
e
GCF_000346735.1
• Zhang et al.
(2012)
Oryza glumipatula
• 489 Mb
•
common wild rice
• n
¼ 12
• MC
•
Poaceae
• I
372,860 71,585
12
31,548
17,912
32
GCA_000576495.1
Musa acuminata
• 611 Mb
•
Malaysian banana
• n
¼ 11
• MC
•
Musaceae
• S4
472,231 81,754
7,512
1,311
29,249
28 34,100
e
GCF_000313855.2
• D’Hont
et al. (2012)
160
D. G. Peterson and M. Arick
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Brassica nigra
• 758 Mb
• black
mustard
• n
¼ 8
• DC
•
Brassicaceae
• I
402,145 47,527
2,545
39,062
21,385
38
GCA_001682895.1
Oryza nivara
• 455 Mb
• Indian
wild rice
• n
¼ 12
• MC
•
Poaceae
• I
337,950 27,953
12
28,646
16,484
38
GCA_000576065.1
Cicer arietinum
• 929 Mb
• chickpea
• n
¼ 8
• DC
• Leguminosae
• I
530,894 48,145
7,545
698
39,024
34 27,650
e
GCF_000331145.1
• Varshney
et al. (2013)
Ziziphus jujuba
• 444 Mb
s
• common jujube
• n
¼ 12
s
• DC
•
Rhamnaceae
• I
437,754 20,440
5,897
301
28,947
34 33,079
e
GCF_000826755.1
• Liu et al.
(2014)
Camelina sativa
• 750 Mb
t
• false
flax • n
¼ 20
t
• DC
•
Brassicaceae
• I4
641,356 45,010
37,212
30,100
72,248
33 97,832
e
GCF_000633955.1
• Kagale et al.
(2014)
Prunus mume
• 280 Mb
s
• Japanese
apricot
• n
¼ 8
s
• DC
• Rosaceae
• I
234,030 16,851
8,626
637
23,761
32 23,553
e
GCF_000346735.1
• Zhang et al.
(2012)
Oryza glumipatula
• 489 Mb
•
common wild rice
• n
¼ 12
• MC
•
Poaceae
• I
372,860 71,585
12
31,548
17,912
32
GCA_000576495.1
Musa acuminata
• 611 Mb
•
Malaysian banana
• n
¼ 11
• MC
•
Musaceae
• S4
472,231 81,754
7,512
1,311
29,249
28 34,100
e
GCF_000313855.2
• D’Hont
et al. (2012)
160
D. G. Peterson and M. Arick