Table 3
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Gossypium arboreum
• 1,677 Mb
•
tree cotton
• n
¼ 13
• DC
•
Malvaceae
• I
1,694,598 133,606
75,419 121,339 121,185
72 39,964
e
GCF_000612285.1
Nicotiana attenuata
• 2,428 Mb
•
coyote tobacco
• n
¼ 12
• DC
•
Solanaceae
• I4P
2,365,683 275,105
37,194
524 103,240
64 39,470
e
GCF_001879085.1
Solanum pennellii
• 1,198 Mb
•
wild tomato
• n
¼ 12
• DC
•
Solanaceae
• IS
926,426 71,063
12
77,991
30,753
60 32,519
e
GCF_001406875.1
• Bolger et al.
(2014a)
Triticum turgidum
• 12,005 Mb
•
emmer wheat
• n
¼ 14
• MC
•
Poaceae
• IH
10,494,955 171,455
149,145 726,428 493,558
57 62,813
k
GCA_900184675.1
• Avni et al.
(2017)
Daucus carota
• 978 Mb
• carrot
•
n
¼ 9
• DC
• Apiaceae
• I4S
421,539 34,733
4,826
36,610
21,054
56 36,045
e
GCF_001625215.1
Lupinus angustiflorus
• 905 Mb
•
narrow-leaved lupin
• n
¼ 20
• DC
• Leguminosae
• I
557,909 4,350
20
30,409
41,861
53
GCA_002285895.1
• Yang et al.
(2013)
Sesamum indicum
• 949 Mb
• sesame
• n
¼ 13
• DC
• Pedaliaceae
• I
275,059 4,573
16,369
2,060
26,176
52 26,417
e
GCF_000512975.1
• Wang et al.
(2014a)
Leersia perrieri
• 323 Mb
q
•
cut-grass
• n
¼ 12
r
• MC
•
Poaceae
• I
266,688 993
12
22,540
9,937
50
GCA_000325765.3
Citrus sinensis
• 611 Mb
• sweet
orange
• n
¼ 9
• DC
• Rutaceae
• I
327,830 26,598
4,995
1,779
17,383
50 28,267
e
GCF_000317415.1
• Xu et al.
(2013)
158
D. G. Peterson and M. Arick
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Gossypium arboreum
• 1,677 Mb
•
tree cotton
• n
¼ 13
• DC
•
Malvaceae
• I
1,694,598 133,606
75,419 121,339 121,185
72 39,964
e
GCF_000612285.1
Nicotiana attenuata
• 2,428 Mb
•
coyote tobacco
• n
¼ 12
• DC
•
Solanaceae
• I4P
2,365,683 275,105
37,194
524 103,240
64 39,470
e
GCF_001879085.1
Solanum pennellii
• 1,198 Mb
•
wild tomato
• n
¼ 12
• DC
•
Solanaceae
• IS
926,426 71,063
12
77,991
30,753
60 32,519
e
GCF_001406875.1
• Bolger et al.
(2014a)
Triticum turgidum
• 12,005 Mb
•
emmer wheat
• n
¼ 14
• MC
•
Poaceae
• IH
10,494,955 171,455
149,145 726,428 493,558
57 62,813
k
GCA_900184675.1
• Avni et al.
(2017)
Daucus carota
• 978 Mb
• carrot
•
n
¼ 9
• DC
• Apiaceae
• I4S
421,539 34,733
4,826
36,610
21,054
56 36,045
e
GCF_001625215.1
Lupinus angustiflorus
• 905 Mb
•
narrow-leaved lupin
• n
¼ 20
• DC
• Leguminosae
• I
557,909 4,350
20
30,409
41,861
53
GCA_002285895.1
• Yang et al.
(2013)
Sesamum indicum
• 949 Mb
• sesame
• n
¼ 13
• DC
• Pedaliaceae
• I
275,059 4,573
16,369
2,060
26,176
52 26,417
e
GCF_000512975.1
• Wang et al.
(2014a)
Leersia perrieri
• 323 Mb
q
•
cut-grass
• n
¼ 12
r
• MC
•
Poaceae
• I
266,688 993
12
22,540
9,937
50
GCA_000325765.3
Citrus sinensis
• 611 Mb
• sweet
orange
• n
¼ 9
• DC
• Rutaceae
• I
327,830 26,598
4,995
1,779
17,383
50 28,267
e
GCF_000317415.1
• Xu et al.
(2013)
158
D. G. Peterson and M. Arick