Table 3
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Utricularia gibba
• 88 Mb
• bladderwort
• n
¼ 14
l
• DC
•
Lentibulariaceae
• SI4
100,689 Unknown
518
3,446
518
3,446 29,666
m
GCA_002189035.1
• IbarraLaclette et al. (2013)
Citrus maxima
• 383 Mb
n
• pummelo
• n
¼ 9
l
• DC
• Rutaceae
• PI
345,757 885
1,612
4,211
2,139
2,916 30,123
k
GCA_002006925.1
• Wang et al.
(2017)
Sorghum bicolor
• 734 Mb
• sorghum
• n
¼ 10
• MC
• Poaceae
• S
709,345 33,371
869
68,658
4,775
1,310 32,716
e
GCF_000003195.3
• Paterson
et al. (2009)
Zea mays
• 2,665 Mb
• maize
•
n
¼ 10
• MC
• Poaceae
• BS
2,135,083 30,733
598
10,525
2,789
1,280 47,429
e
GCF_000005005.2
• Schnable
et al. (2009)
Arabis alpina
• 372 Mb
• gray
rockcress
• n
¼ 8
• DC
•
Brassicaceae
• I4S
311,642 10,865
8
36,598
1,637
895 23,265
o
GCA_900128785.1
• Willing
et al. (2015)
Helianthus annuus
• 2,372 Mb
•common sunflower
• n
¼ 17
• DC
• Compositae
• PI
3,027,845 102,549
1,528 178,899
13,954
414 81,134
e
GCF_002127325.1
• Badouin
et al. (2017)
Medicago truncatula
• 465 Mb
•
barrel medic
• n
¼ 8
• DC
•
Leguminosae
• S
412,924 22,825
2,187
49,172
8,027
339 51,516
e
GCF_000219495.3
• Young et al.
(2011)
Prunus persica
• 269 Mb
• peach
•
n
¼ 8
• DC
• Rosaceae
• S
227,569 2,772
192
27,368
2,531
255 26,275
e
GCF_000346465.2
• International Peach Genome Initiative
et al. (2013)
Populus trichocarpa
• 484 Mb
•
black cottonwood
• n
¼ 19
• DC
•
Salicaceae
• S
417,287 13,387
2,514
18,836
13,561
242 45,555
k
GCF_000002775.3
• Tuskan
et al. (2006)
Glycine max
• 1,100 Mb
• soybean
• n
¼ 20
• DC
• Leguminosae
• S
978,972 23,047
1,191
48,578
17,146
183 58,605
e
GCF_000004515.4
• Schmutz
et al. (2010)
156
D. G. Peterson and M. Arick
(continued)
Species
• 1C DNA content
b
•
common name
• chromosome
number
b
• angiosperm group
(MC
¼ monocot; DC
¼ dicot) if
applicable)
• family
• sequencing
strategy
c
Total
assembly
length
(Kb)
Total
assembly
gap length
(Kb)
Scaffold
number
Scaffold
N50
(Kb)
Contig
number
Contig
N50
(Kb)
Gene
number
NCBI assembly accession
•
genome paper reference
Utricularia gibba
• 88 Mb
• bladderwort
• n
¼ 14
l
• DC
•
Lentibulariaceae
• SI4
100,689 Unknown
518
3,446
518
3,446 29,666
m
GCA_002189035.1
• IbarraLaclette et al. (2013)
Citrus maxima
• 383 Mb
n
• pummelo
• n
¼ 9
l
• DC
• Rutaceae
• PI
345,757 885
1,612
4,211
2,139
2,916 30,123
k
GCA_002006925.1
• Wang et al.
(2017)
Sorghum bicolor
• 734 Mb
• sorghum
• n
¼ 10
• MC
• Poaceae
• S
709,345 33,371
869
68,658
4,775
1,310 32,716
e
GCF_000003195.3
• Paterson
et al. (2009)
Zea mays
• 2,665 Mb
• maize
•
n
¼ 10
• MC
• Poaceae
• BS
2,135,083 30,733
598
10,525
2,789
1,280 47,429
e
GCF_000005005.2
• Schnable
et al. (2009)
Arabis alpina
• 372 Mb
• gray
rockcress
• n
¼ 8
• DC
•
Brassicaceae
• I4S
311,642 10,865
8
36,598
1,637
895 23,265
o
GCA_900128785.1
• Willing
et al. (2015)
Helianthus annuus
• 2,372 Mb
•common sunflower
• n
¼ 17
• DC
• Compositae
• PI
3,027,845 102,549
1,528 178,899
13,954
414 81,134
e
GCF_002127325.1
• Badouin
et al. (2017)
Medicago truncatula
• 465 Mb
•
barrel medic
• n
¼ 8
• DC
•
Leguminosae
• S
412,924 22,825
2,187
49,172
8,027
339 51,516
e
GCF_000219495.3
• Young et al.
(2011)
Prunus persica
• 269 Mb
• peach
•
n
¼ 8
• DC
• Rosaceae
• S
227,569 2,772
192
27,368
2,531
255 26,275
e
GCF_000346465.2
• International Peach Genome Initiative
et al. (2013)
Populus trichocarpa
• 484 Mb
•
black cottonwood
• n
¼ 19
• DC
•
Salicaceae
• S
417,287 13,387
2,514
18,836
13,561
242 45,555
k
GCF_000002775.3
• Tuskan
et al. (2006)
Glycine max
• 1,100 Mb
• soybean
• n
¼ 20
• DC
• Leguminosae
• S
978,972 23,047
1,191
48,578
17,146
183 58,605
e
GCF_000004515.4
• Schmutz
et al. (2010)
156
D. G. Peterson and M. Arick