190
their taxon for 106 PubMed articles. The resource includes an elaborated list of
1,757,316 taxon. Among these, seven taxon include “Homo sapiens” in their scientific names. We retrieved ~24 million PubMed articles with MeSH index and
mapped organisms’ scientific names or synonyms to the MeSH index. Our approach
revealed many organisms other than humans for 106 articles (Table 12.1). Five articles did not include any annotations for organisms (PMID: 30816973, 30804121,
29458859, 29096192 and 28890395).
Table 12.1 Organism annotation for PubMed articles related to fungal siderophores and humans
PMID
Organisms
Taxon
29038255; 22869730
Pseudomonas aeruginosa | Aspergillus
fumigatus |
Homo sapiens
287 | 746128 |
9606
28859314
Viruses | Staphylococcus aureus |
Pseudomonas aeruginosa
| Aspergillus fumigatus | Homo sapiens
10239 | 1280 |
287 |
746128 | 9606
28730969; 28229977; 24312900;
22360467; 15328098; 6721470
Fungi | Bacteria Latreille et al. 1825 |
Homo sapiens
4751 | 629395 |
9606
28217776
Metazoa | Cryptococcus neoformans |
Aspergillus fumigatus | Homo sapiens
33208 | 5207 |
746128 | 9606
27797604; 24982320; 21399939;
18280720
Metazoa | Fungi | Homo sapiens
33208 | 4751 |
9606
27243961
Aspergillus | Cladosporium | Homo
sapiens
5052 | 5498 |
9606
27060291
Rattus sp. | Metazoa | Aspergillus |
Homo sapiens
10118 | 33208 |
5052 | 9606
26974544; 26739764; 19453952;
14977945
Aspergillus fumigatus | Homo sapiens 746128 | 9606
26960149;
Arthrodermataceae | Homo sapiens
34384 | 9606
26712125; 17235665; 16003938;
6452038
Fungi | Homo sapiens
4751 | 9606
26431675; 22393938; 7826025
Metazoa | Fungi | Bacteria Latreille
et al. 1825 |
Homo sapiens
33208 | 4751 |
629395 | 9606
26195554
Legionella pneumophila |
Cunninghamella |
Homo sapiens
446 | 4852 |
9606
25121733; 17194657; 3060947
Mucorales | Homo sapiens
4827 | 9606
24984952
Aureobasidium namibiae CBS 147.97 |
Aureobasidium
subglaciale EXF-2481 | Ascomycota |
Homo sapiens
1043004 |
1043005 |
4890 | 9606
24416162; 19917080; 17082767
Saccharomyces cerevisiae | Homo
sapiens
4932 | 9606
(continued)
A. Prabahar et al.