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75
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reads with GraphMap. Nat Commun 7:11307
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The draft genome of tropical fruit durian (Durio
zibethinus). Nat Genet 49:1633–1641
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Vandenhove H et al (2015) The first draft genome of
the aquatic model plant Lemna minor opens the route
for future stress physiology research and biotechnological applications. Biotechnol Biofuels 8:188
VanBuren R, Bryant D, Edger PP, Tang H, Burgess D
et al (2015) Single-molecule sequencing of the
desiccation- tolerant grass Oropetium thomaeum.
Nature 527:508–511
Wang W, Haberer G, Gundlach H, Glasser C, Nussbaumer T et al (2014) The Spirodela polyrhiza
genome reveals insights into its neotenous reduction
fast growth and aquatic lifestyle. Nat Commun 5:3311
Wang W, Kerstetter RA, Michael TP (2011) Evolution of
genome size in duckweeds (Lemnaceae). J Botany
Weirather JL, de Cesare M, Wang Y, Piazza P, Sebastiano V et al (2017) Comprehensive comparison of
pacific biosciences and oxford nanopore technologies
and their applications to transcriptome analysis.
F1000Res 6:100
Willing EM, Rawat V, Mandakova T, Maumus F,
James GV et al (2015) Genome expansion of Arabis
alpina linked with retrotransposition and reduced
symmetric DNA methylation. Nature Plants 1:14023
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Improved de novo genome assembly and analysis of
the Chinese cucurbit Siraitia grosvenorii, also known
as monk fruit or luo-han-guo. GigaScience 7:giy067
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(2017) MECAT: fast mapping, error correction, and
de novo assembly for single-molecule sequencing
reads. Nat Methods 14:1072–1074
Zhang GQ, Liu KW, Li Z, Lohaus R, Hsiao YY et al
(2017) The Apostasia genome and the evolution of
orchids. Nature 549:379–383
Zimin A, Stevens KA, Crepeau MW, Holtz-Morris A,
Koriabine M et al (2014) Sequencing and assembly of
the 22-gb loblolly pine genome. Genetics 196:875–
890
Zimin AV, Marçais G, Puiu D, Roberts M, Salzberg SL
et al (2013) The MaSuRCA genome assembler.
Bioinformatics 29:2669–2677
Zimin AV, Puiu D, Luo M-C, Zhu T, Koren S et al (2017)
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genome of Aegilops tauschii, a progenitor of bread
wheat, with the MaSuRCA mega-reads algorithm.
Genome research
6 Strategies and Tools for Sequencing Duckweeds
75