71. F. Amat, L.R. Comolli, F. Moussavi, J. Smit, K.H. Downing, M. Horowitz, Subtomogram
alignment by adaptive Fourier coefficient thresholding. J. Struct. Biol. 171(3), 332–344
(2010)
72. D. Castaño-Díez, M. Kudryashev, M. Arheit, H. Stahlberg, Dynamo: a flexible, user-friendly
development tool for subtomogram averaging of cryo-EM data in high-performance
computing environments. J. Struct. Biol. 178(2), 139–151 (2012)
73. J.G. Galaz-Montoya, J. Flanagan, M.F. Schmid, S.J. Ludtke, Single particle tomography in
EMAN2. J. Struct. Biol. 190(3), 279–290 (2015)
74. A.M. Roseman, Particle finding in electron micrographs using a fast local correlation
algorithm. Ultramicroscopy 94(3–4), 225–236 (2003)
75. S.M. Stagg, A.J. Noble, M. Spilman, M. Chapman, ResLog plots as an empirical metric of the
quality of cryo-EM reconstructions. J. Struct. Biol. 185(3), 418–426 (2014)
76. D. Castaño-Díez, M. Kudryashev, H. Stahlberg, “Dynamo Catalogue: Geometrical tools and
data management for particle picking in subtomogram averaging of cryo-electron tomograms,” J. Struct. Biol. (2016)
77. F. Förster, B.-G. Han, M. Beck, Visual proteomics. Methods Enzymol. 483, 215–243 (2010)
78. M. Stölken et al., Maximum likelihood based classification of electron tomographic data.
J. Struct. Biol. 173(1), 77–85 (2011)
79. M.G. Campbell et al., “Movies of ice-embedded particles enhance resolution in electron
cryo-microscopy,” Struct. Lond. Engl. 1993 20(11), 1823–1828 (2012)
282
M. Kudryashev
alignment by adaptive Fourier coefficient thresholding. J. Struct. Biol. 171(3), 332–344
(2010)
72. D. Castaño-Díez, M. Kudryashev, M. Arheit, H. Stahlberg, Dynamo: a flexible, user-friendly
development tool for subtomogram averaging of cryo-EM data in high-performance
computing environments. J. Struct. Biol. 178(2), 139–151 (2012)
73. J.G. Galaz-Montoya, J. Flanagan, M.F. Schmid, S.J. Ludtke, Single particle tomography in
EMAN2. J. Struct. Biol. 190(3), 279–290 (2015)
74. A.M. Roseman, Particle finding in electron micrographs using a fast local correlation
algorithm. Ultramicroscopy 94(3–4), 225–236 (2003)
75. S.M. Stagg, A.J. Noble, M. Spilman, M. Chapman, ResLog plots as an empirical metric of the
quality of cryo-EM reconstructions. J. Struct. Biol. 185(3), 418–426 (2014)
76. D. Castaño-Díez, M. Kudryashev, H. Stahlberg, “Dynamo Catalogue: Geometrical tools and
data management for particle picking in subtomogram averaging of cryo-electron tomograms,” J. Struct. Biol. (2016)
77. F. Förster, B.-G. Han, M. Beck, Visual proteomics. Methods Enzymol. 483, 215–243 (2010)
78. M. Stölken et al., Maximum likelihood based classification of electron tomographic data.
J. Struct. Biol. 173(1), 77–85 (2011)
79. M.G. Campbell et al., “Movies of ice-embedded particles enhance resolution in electron
cryo-microscopy,” Struct. Lond. Engl. 1993 20(11), 1823–1828 (2012)
282
M. Kudryashev