481
Sanger F, Nicklen S, Coulson A (1977) DNA sequencing with chain-terminating inhibitors. Proc
Natl Acad Sci USA 74:5463–5467
Secretaría de Ambiente y Desarrollo Sustentable – Dirección de Bosques (2007) Informe sobre
desforestación en Argentina
Sewell M, Neale D (2000) Mapping quantitative traits in forest trees. Molecular biology of woody
plants. For Sci 64:407–423
Stephens Z, Lee S, Faghri F, Campbell R, Zhai C, Efron M et al (2015) Big data: astronomical or
genomical. PLoS Biol 13:e1002195
Silva A, Ribeiro de Paiva S, Figueiredo M, Coelho Kaplan M (2012) Biological activity of naphthoquinones from Bignoniaceae species. Revista Fitos 7:4
Sola G, El Mujtar V, Gallo L, Vendramin G, Marchelli P (2020) Staying close: short local dispersal
distances on a managed forest of two Patagonian Nothofagus spp. Forestry 93(5):652–661
Soliani C, Sebastiani F, Marchelli P, Gallo L, Vendramin G (2010) Development of novel genomic
microsatellite markers in the southern beech Nothofagus pumilio (Poepp. Et Endl.) Krasser.
Mol Ecol Res 10:404–408
Soliani C, Azpilicueta M, Arana M, Marchelli P (2020) Clinal variation along precipitation gradients in Patagonian temperate forests: unravelling demographic and selection signatures in three
Nothofagus spp. Ann For Sci 77:4
Strauss S, Lande R, Namkoong G (1992) Limitations of molecular-marker-aided selection in forest
tree breeding. Can J For Res 22:1050–1061
Tangphatsornruang S, Sangsrakru D, Chanprasert J, Uthaipaisanwong P, Yoocha T, Jomchai N,
Tragoonrung S (2010) The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: structural organization and phylogenetic relationships. DNA Res 17:11–22
Thistlethwaite F, Ratcliffe B, Klápště J, Porth I, Chen C, Stoehr M, El-Kassaby Y (2019) Genomic
selection of juvenile height across a single-generational gap in Douglas-fir. Heredity 122:848
Thornsberry J, Goodman M, Doebley J, Kresovich S, Nielsen D, Buckler E (2001) Dwarf polymorphisms associate with variation in flowering time. Nat Genet 28:286–289
Torales S, Rivarola M, Pomponio M, Fernández P, Acuña C, Marchelli P et al (2012) Transcriptome
survey of Patagonian southern beech Nothofagus nervosa (= N. alpina): assembly, annotation
and molecular marker discovery. BMC Genomics 13:291
Torales S, Rivarola M, Pomponio M, Gonzalez S, Acuña C, Fernández P et al (2013) De novo
assembly and characterization of leaf transcriptome for the development of functional molecular
markers of the extremophile multipurpose tree species Prosopis alba. BMC Genomics 14:705
Torales S, Rivarola M, Gonzalez S, Inza M, Pomponio M, Fernández P et al (2018) De novo transcriptome sequencing and SSR markers development for Cedrela balansae C.DC., a native tree
species of northwest Argentina. PLoS One 13:e0203768
Toro M, Varona L (2010) A note on mate allocation for dominance handling in genomic selection.
Genet Sel Evol 42:33
Torre S, Tattini M, Brunetti C, Fineschi S, Fini A, Ferrini F, Sebastiani F (2014) RNA-Seq analysis of Quercus pubescens leaves: de novo transcriptome assembly, annotation and functional
markers development. PLoS One 9:e112487
Tuskan G, DiFazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U et al (2006) The genome of
black cottonwood, Populus trichocarpa (Torr. and Gray). Science 313:1596–1604
Tyson J, O’Neil N, Jain M, Olsen H, Hieter P, Snutch T (2018) MinION-based long-read sequencing
and assembly extends the Caenorhabditis elegans reference genome. Genome Res 28:266–274
Ueno S, Le Provost G, Léger V, Klopp NC, Frigerio J et al (2010) Bioinformatic analysis of ESTs
collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak. BMC
Genomics 11:650
Varela S, Gyenge J, Fernández ME, Schlichter T (2010) Seedling drought stress susceptibility in
two deciduous Nothofagus species of NW Patagonia. Trees 24:443–453
Venter J (2001) The sequence of the human genome. Science 291:1304–1351
17 Application of High-Throughput Sequencing Technologies in Native Forest Tree…
Sanger F, Nicklen S, Coulson A (1977) DNA sequencing with chain-terminating inhibitors. Proc
Natl Acad Sci USA 74:5463–5467
Secretaría de Ambiente y Desarrollo Sustentable – Dirección de Bosques (2007) Informe sobre
desforestación en Argentina
Sewell M, Neale D (2000) Mapping quantitative traits in forest trees. Molecular biology of woody
plants. For Sci 64:407–423
Stephens Z, Lee S, Faghri F, Campbell R, Zhai C, Efron M et al (2015) Big data: astronomical or
genomical. PLoS Biol 13:e1002195
Silva A, Ribeiro de Paiva S, Figueiredo M, Coelho Kaplan M (2012) Biological activity of naphthoquinones from Bignoniaceae species. Revista Fitos 7:4
Sola G, El Mujtar V, Gallo L, Vendramin G, Marchelli P (2020) Staying close: short local dispersal
distances on a managed forest of two Patagonian Nothofagus spp. Forestry 93(5):652–661
Soliani C, Sebastiani F, Marchelli P, Gallo L, Vendramin G (2010) Development of novel genomic
microsatellite markers in the southern beech Nothofagus pumilio (Poepp. Et Endl.) Krasser.
Mol Ecol Res 10:404–408
Soliani C, Azpilicueta M, Arana M, Marchelli P (2020) Clinal variation along precipitation gradients in Patagonian temperate forests: unravelling demographic and selection signatures in three
Nothofagus spp. Ann For Sci 77:4
Strauss S, Lande R, Namkoong G (1992) Limitations of molecular-marker-aided selection in forest
tree breeding. Can J For Res 22:1050–1061
Tangphatsornruang S, Sangsrakru D, Chanprasert J, Uthaipaisanwong P, Yoocha T, Jomchai N,
Tragoonrung S (2010) The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: structural organization and phylogenetic relationships. DNA Res 17:11–22
Thistlethwaite F, Ratcliffe B, Klápště J, Porth I, Chen C, Stoehr M, El-Kassaby Y (2019) Genomic
selection of juvenile height across a single-generational gap in Douglas-fir. Heredity 122:848
Thornsberry J, Goodman M, Doebley J, Kresovich S, Nielsen D, Buckler E (2001) Dwarf polymorphisms associate with variation in flowering time. Nat Genet 28:286–289
Torales S, Rivarola M, Pomponio M, Fernández P, Acuña C, Marchelli P et al (2012) Transcriptome
survey of Patagonian southern beech Nothofagus nervosa (= N. alpina): assembly, annotation
and molecular marker discovery. BMC Genomics 13:291
Torales S, Rivarola M, Pomponio M, Gonzalez S, Acuña C, Fernández P et al (2013) De novo
assembly and characterization of leaf transcriptome for the development of functional molecular
markers of the extremophile multipurpose tree species Prosopis alba. BMC Genomics 14:705
Torales S, Rivarola M, Gonzalez S, Inza M, Pomponio M, Fernández P et al (2018) De novo transcriptome sequencing and SSR markers development for Cedrela balansae C.DC., a native tree
species of northwest Argentina. PLoS One 13:e0203768
Toro M, Varona L (2010) A note on mate allocation for dominance handling in genomic selection.
Genet Sel Evol 42:33
Torre S, Tattini M, Brunetti C, Fineschi S, Fini A, Ferrini F, Sebastiani F (2014) RNA-Seq analysis of Quercus pubescens leaves: de novo transcriptome assembly, annotation and functional
markers development. PLoS One 9:e112487
Tuskan G, DiFazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U et al (2006) The genome of
black cottonwood, Populus trichocarpa (Torr. and Gray). Science 313:1596–1604
Tyson J, O’Neil N, Jain M, Olsen H, Hieter P, Snutch T (2018) MinION-based long-read sequencing
and assembly extends the Caenorhabditis elegans reference genome. Genome Res 28:266–274
Ueno S, Le Provost G, Léger V, Klopp NC, Frigerio J et al (2010) Bioinformatic analysis of ESTs
collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak. BMC
Genomics 11:650
Varela S, Gyenge J, Fernández ME, Schlichter T (2010) Seedling drought stress susceptibility in
two deciduous Nothofagus species of NW Patagonia. Trees 24:443–453
Venter J (2001) The sequence of the human genome. Science 291:1304–1351
17 Application of High-Throughput Sequencing Technologies in Native Forest Tree…