2 Bioefficacy of Endophytes in the Control of Plant Diseases
29
Dissanayake AJ et al (2018) Direct comparison of culture-dependent and culture-independent
molecular approaches reveal the diversity of fungal endophytic communities in stems of grapevine
(Vitis vinifera). Fungal Divers 90:85–107. https://doi.org/10.1007/s13225-018-0399-3
Dupont P-Y et al (2015) Fungal endophyte infection of ryegrass reprograms host metabolism and
alters development. New Phytol 208:1227–1240. https://doi.org/10.1111/nph.13614
Emmert EAB, Handelsman J (1999) Biocontrol of plant disease: a (Gram-) positive perspective.
FEMS Microbiol Lett 171:1–9. https://doi.org/10.1111/j.1574-6968.1999.tb13405.x
Etesami H, Alikhani HA (2016) Rhizosphere and endorhiza of oilseed rape (Brassica napus L.)
plant harbor bacteria with multifaceted beneficial effects. Biol Control 94:11–24. https://doi.org/
10.1016/j.biocontrol.2015.12.003
Faeth SH, Fagan WF (2002) Fungal endophytes: common host plant symbionts but uncommon
mutualists. Integr Comp Biol 42:360–368. https://doi.org/10.1093/icb/42.2.360
Ferraz P, Cássio F, Lucas C (2019) Potential of yeasts as biocontrol agents of the phytopathogen
causing cacao witches’ broom disease: is microbial warfare a solution? Frontiers in Microbiology
10. https://doi.org/10.3389/fmicb.2019.01766
Ferrigo D, Causin R, Raiola A (2017) Effect of potential biocontrol agents selected among grapevine
endophytes and commercial products on crown gall disease. Biocontrol 62:821–833. https://doi.
org/10.1007/s10526-017-9847-3
Fuchs B, Krauss J (2019) Can Epichloë endophytes enhance direct and indirect plant defence?
Fungal Ecology 38:98–103. https://doi.org/10.1016/j.funeco.2018.07.002
Gai CS, Lacava PT, Maccheroni W Jr, Glienke C, Araújo WL, Miller TA, Azevedo JL (2009)
Diversity of endophytic yeasts from sweet orange and their localization by scanning electron
microscopy. J Basic Microbiol 49:441–451. https://doi.org/10.1002/jobm.200800328
Gao F-k, Dai C-c, Liu X-z (2010) Mechanisms of fungal endophytes in plant protection against
pathogens. Afr J Microbiol Res 4:1346–1351
Garbeva P, Voesenek K, Elsas JDv (2004) Quantitative detection and diversity of the pyrrolnitrin
biosynthetic locus in soil under different treatments. Soil Biology and Biochemistry 36:1453–
1463. https://doi.org/10.1016/j.soilbio.2004.03.009
Ghazalibiglar H, Hampton JG, van ZijlldeJong E, Holyoake A (2016) Evaluation of Paenibacillus
spp. isolates for the biological control of black rot in Brassica oleracea var. capitata (cabbage).
Biocontrol Sci Technol 26:504–515. https://doi.org/10.1080/09583157.2015.1129052
Gómez-Lama Cabanás C, Schiliro E, Valverde-Corredor A, Mercado-Blanco J (2014) The biocontrol endophytic bacterium Pseudomonas fluorescens PICF7 induces systemic defense responses
in aerial tissues upon colonization of olive roots. Frontiers in Microbiology 5. https://doi.org/10.
3389/fmicb.2014.00427
Haas D, Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads.
Nat Rev Microbiol 3:307–319
Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in
agricultural crops. Can J Microbiol 43:895–914. https://doi.org/10.1139/m97-131
Hazarika DJ, Goswami G, Gautom T, Parveen A, Das P, Barooah M, Boro RC (2019) Lipopeptide
mediated biocontrol activity of endophytic Bacillus subtilis against fungal phytopathogens. BMC
Microbiol 19:71. https://doi.org/10.1186/s12866-019-1440-8
Hill DS et al (1994) Cloning of genes involved in the synthesis of pyrrolnitrin from Pseudomonas
fluorescens and role of pyrrolnitrin synthesis in biological control of plant disease. Appl Environ
Microbiol 60:78–85
Hong CE, Kim JU, Lee JW, Bang KH, Jo IH (2019) Metagenomic analysis of bacterial endophyte
community structure and functions in Panax ginseng at different ages. 3 Biotech 9:300. https://
doi.org/10.1007/s13205-019-1838-x
Huang Z, Bonsall RF, Mavrodi DV, Weller DM, Thomashow LS (2004) Transformation of Pseudomonas fluorescens with genes for biosynthesis of phenazine-1-carboxylic acid improves
biocontrol of rhizoctonia root rot and in situ antibiotic production. FEMS Microbiol Ecol
49:243–251. https://doi.org/10.1016/j.femsec.2004.03.010
Hyde KD, Soytong K (2008) The fungal endophyte dilemma. Fungal Divers 33:163–173
29
Dissanayake AJ et al (2018) Direct comparison of culture-dependent and culture-independent
molecular approaches reveal the diversity of fungal endophytic communities in stems of grapevine
(Vitis vinifera). Fungal Divers 90:85–107. https://doi.org/10.1007/s13225-018-0399-3
Dupont P-Y et al (2015) Fungal endophyte infection of ryegrass reprograms host metabolism and
alters development. New Phytol 208:1227–1240. https://doi.org/10.1111/nph.13614
Emmert EAB, Handelsman J (1999) Biocontrol of plant disease: a (Gram-) positive perspective.
FEMS Microbiol Lett 171:1–9. https://doi.org/10.1111/j.1574-6968.1999.tb13405.x
Etesami H, Alikhani HA (2016) Rhizosphere and endorhiza of oilseed rape (Brassica napus L.)
plant harbor bacteria with multifaceted beneficial effects. Biol Control 94:11–24. https://doi.org/
10.1016/j.biocontrol.2015.12.003
Faeth SH, Fagan WF (2002) Fungal endophytes: common host plant symbionts but uncommon
mutualists. Integr Comp Biol 42:360–368. https://doi.org/10.1093/icb/42.2.360
Ferraz P, Cássio F, Lucas C (2019) Potential of yeasts as biocontrol agents of the phytopathogen
causing cacao witches’ broom disease: is microbial warfare a solution? Frontiers in Microbiology
10. https://doi.org/10.3389/fmicb.2019.01766
Ferrigo D, Causin R, Raiola A (2017) Effect of potential biocontrol agents selected among grapevine
endophytes and commercial products on crown gall disease. Biocontrol 62:821–833. https://doi.
org/10.1007/s10526-017-9847-3
Fuchs B, Krauss J (2019) Can Epichloë endophytes enhance direct and indirect plant defence?
Fungal Ecology 38:98–103. https://doi.org/10.1016/j.funeco.2018.07.002
Gai CS, Lacava PT, Maccheroni W Jr, Glienke C, Araújo WL, Miller TA, Azevedo JL (2009)
Diversity of endophytic yeasts from sweet orange and their localization by scanning electron
microscopy. J Basic Microbiol 49:441–451. https://doi.org/10.1002/jobm.200800328
Gao F-k, Dai C-c, Liu X-z (2010) Mechanisms of fungal endophytes in plant protection against
pathogens. Afr J Microbiol Res 4:1346–1351
Garbeva P, Voesenek K, Elsas JDv (2004) Quantitative detection and diversity of the pyrrolnitrin
biosynthetic locus in soil under different treatments. Soil Biology and Biochemistry 36:1453–
1463. https://doi.org/10.1016/j.soilbio.2004.03.009
Ghazalibiglar H, Hampton JG, van ZijlldeJong E, Holyoake A (2016) Evaluation of Paenibacillus
spp. isolates for the biological control of black rot in Brassica oleracea var. capitata (cabbage).
Biocontrol Sci Technol 26:504–515. https://doi.org/10.1080/09583157.2015.1129052
Gómez-Lama Cabanás C, Schiliro E, Valverde-Corredor A, Mercado-Blanco J (2014) The biocontrol endophytic bacterium Pseudomonas fluorescens PICF7 induces systemic defense responses
in aerial tissues upon colonization of olive roots. Frontiers in Microbiology 5. https://doi.org/10.
3389/fmicb.2014.00427
Haas D, Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads.
Nat Rev Microbiol 3:307–319
Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in
agricultural crops. Can J Microbiol 43:895–914. https://doi.org/10.1139/m97-131
Hazarika DJ, Goswami G, Gautom T, Parveen A, Das P, Barooah M, Boro RC (2019) Lipopeptide
mediated biocontrol activity of endophytic Bacillus subtilis against fungal phytopathogens. BMC
Microbiol 19:71. https://doi.org/10.1186/s12866-019-1440-8
Hill DS et al (1994) Cloning of genes involved in the synthesis of pyrrolnitrin from Pseudomonas
fluorescens and role of pyrrolnitrin synthesis in biological control of plant disease. Appl Environ
Microbiol 60:78–85
Hong CE, Kim JU, Lee JW, Bang KH, Jo IH (2019) Metagenomic analysis of bacterial endophyte
community structure and functions in Panax ginseng at different ages. 3 Biotech 9:300. https://
doi.org/10.1007/s13205-019-1838-x
Huang Z, Bonsall RF, Mavrodi DV, Weller DM, Thomashow LS (2004) Transformation of Pseudomonas fluorescens with genes for biosynthesis of phenazine-1-carboxylic acid improves
biocontrol of rhizoctonia root rot and in situ antibiotic production. FEMS Microbiol Ecol
49:243–251. https://doi.org/10.1016/j.femsec.2004.03.010
Hyde KD, Soytong K (2008) The fungal endophyte dilemma. Fungal Divers 33:163–173