200
H. B. Slama et al.
Ijaz A, Imran A, ul Haq MA, Khan QM, Afzal M (2016) Phytoremediation: recent advances in plantendophytic synergistic interactions. Plant Soil 405:179–195. http://doi.org/10.1007/s11104-0152606-2
Jalgaonwala RE, Mohite BV, Mahajan RT (2011) A review: natural products from plant associated
endophytic fungi. J Microbiol Biotechnol Res 1:21–32
James EK, Olivares FL, Baldani JI, Döbereiner J (1997) Herbaspirillum, an endophytic diazotroph
colonizing vascular tissue 3 Sorghum bicolor L. Moench J Exp Bot 48:785–798. https://doi.org/
10.1093/jxb/48.3.785
Jasim B, Joseph AA, John CJ, Mathew J, Radhakrishnan EK (2014) Isolation and characterization
of plant growth promoting endophytic bacteria from the rhizome of Zingiber officinale. 3 Biotech
4:197–204. https://doi.org/10.1007/s13205-013-0143-3
Johnston-Monje D, Raizada MN (2011) Conservation and diversity of seed associated endophytes
in Zea across boundaries of evolution, ethnography and ecology. PLoS One 6:e20396. https://
doi.org/10.1371/journal.pone.0020396
Kado CI (1992) Plant pathogenic bacteria. Prokaryotes, pp 660–662
Kaul S, Sharma T, K Dhar M (2016) “Omics” tools for better understanding the plant–endophyte
interactions. Front Plant Sci 7:955. http://doi.org/10.3389/fpls.2016.00955
Kergunteuil A, Bakhtiari M, Formenti L, Xiao Z, Defossez E, Rasmann S (2016) Biological control
beneath the feet: a review of crop protection against insect root herbivores. Insects 7:70. https://
doi.org/10.3390/insects7040070
Khan N, Martínez-Hidalgo P, Ice TA, Maymon M, Humm EA, Nejat N, Sanders ER, Kaplan D,
Hirsch AM (2018) Antifungal activity of Bacillus species against Fusarium and analysis of the
potential mechanisms used in biocontrol. Front Microbiol 9:2363. https://doi.org/10.3389/fmicb.
2018.02363
Kharwar RN, Mishra A, Gond SK, Stierle A, Stierle D (2011) Anticancer compounds derived from
fungal endophytes: their importance and future challenges. Nat Prod Rep 28:1208–1228. https://
doi.org/10.1039/c1np00008j
Khiralla A, Spina R, Yagi S, Mohamed I, Laurain-Mattar D (2017) Endophytic fungi: occurrence,
classification, function and natural products. In: Endophytic fungi: diversity, characterization and
biocontrol. Nova Science, pp 1–38
Kinoshita K, Tamaki S, Yoshioka M, Srithonguthai S, Kunihiro T, Ohwada K, Tsutsumi H (2008)
Bioremediation of organically enriched sediment deposited below fish farms with artificially
mass-cultured colonies of a deposit-feeding polychaete Capitella sp. I Fish Sci 74:77–87. https://
doi.org/10.1111/j.1444-2906.2007.01498.x
Kiran YK, Barkat A, Cui X, Ying F, Pan F, Lin T, Yang X (2017) Cow manure and cow manurederived biochar application as a soil amendment for reducing cadmium availability and accumulation by Brassica chinensis L. in acidic red soil. J Integr Agric 16:725–734. http://doi.org/10.
1016/S2095-3119(16)61488-0
Kodama Y, Shumway M, Leinonen R (2011) The sequence read archive: explosive growth of
sequencing data. Nucleic Acids Res 40:D54–D56. https://doi.org/10.1093/nar/gkr854
Kousha M, Daneshvar E, Sohrabi MS, Koutahzadeh N, Khataee AR (2012) Optimization of CI
Acid black 1 biosorption by Cystoseira indica and Gracilaria persica biomasses from aqueous
solutions. Int Biodeter Biodegr 67:56–63. https://doi.org/10.1016/j.ibiod.2011.10.007
Kuhn BM, Nodzy´ nski T, Errafi S, Bucher R, Gupta S, Aryal B, Dobrev P, Bigler L, Geisler M,
Zažímalová E, Friml J, Ringli C (2017) Flavonol-induced changes in PIN2 polarity and auxin
transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Sci Rep 7:41906.
https://doi.org/10.1038/srep41906
Kumar A, Verma JP (2018) Does plant-microbe interaction confer stress tolerance in plants: a
review? Microbiol Res 207:41–52. https://doi.org/10.1016/j.micres.2017.11.004
Kumar P, Dubey RC, Maheshwari DK (2012) Bacillus strains isolated from rhizosphere showed
plant growth promoting and antagonistic activity against phytopathogens. Microbiol Res
167(8):493–499
H. B. Slama et al.
Ijaz A, Imran A, ul Haq MA, Khan QM, Afzal M (2016) Phytoremediation: recent advances in plantendophytic synergistic interactions. Plant Soil 405:179–195. http://doi.org/10.1007/s11104-0152606-2
Jalgaonwala RE, Mohite BV, Mahajan RT (2011) A review: natural products from plant associated
endophytic fungi. J Microbiol Biotechnol Res 1:21–32
James EK, Olivares FL, Baldani JI, Döbereiner J (1997) Herbaspirillum, an endophytic diazotroph
colonizing vascular tissue 3 Sorghum bicolor L. Moench J Exp Bot 48:785–798. https://doi.org/
10.1093/jxb/48.3.785
Jasim B, Joseph AA, John CJ, Mathew J, Radhakrishnan EK (2014) Isolation and characterization
of plant growth promoting endophytic bacteria from the rhizome of Zingiber officinale. 3 Biotech
4:197–204. https://doi.org/10.1007/s13205-013-0143-3
Johnston-Monje D, Raizada MN (2011) Conservation and diversity of seed associated endophytes
in Zea across boundaries of evolution, ethnography and ecology. PLoS One 6:e20396. https://
doi.org/10.1371/journal.pone.0020396
Kado CI (1992) Plant pathogenic bacteria. Prokaryotes, pp 660–662
Kaul S, Sharma T, K Dhar M (2016) “Omics” tools for better understanding the plant–endophyte
interactions. Front Plant Sci 7:955. http://doi.org/10.3389/fpls.2016.00955
Kergunteuil A, Bakhtiari M, Formenti L, Xiao Z, Defossez E, Rasmann S (2016) Biological control
beneath the feet: a review of crop protection against insect root herbivores. Insects 7:70. https://
doi.org/10.3390/insects7040070
Khan N, Martínez-Hidalgo P, Ice TA, Maymon M, Humm EA, Nejat N, Sanders ER, Kaplan D,
Hirsch AM (2018) Antifungal activity of Bacillus species against Fusarium and analysis of the
potential mechanisms used in biocontrol. Front Microbiol 9:2363. https://doi.org/10.3389/fmicb.
2018.02363
Kharwar RN, Mishra A, Gond SK, Stierle A, Stierle D (2011) Anticancer compounds derived from
fungal endophytes: their importance and future challenges. Nat Prod Rep 28:1208–1228. https://
doi.org/10.1039/c1np00008j
Khiralla A, Spina R, Yagi S, Mohamed I, Laurain-Mattar D (2017) Endophytic fungi: occurrence,
classification, function and natural products. In: Endophytic fungi: diversity, characterization and
biocontrol. Nova Science, pp 1–38
Kinoshita K, Tamaki S, Yoshioka M, Srithonguthai S, Kunihiro T, Ohwada K, Tsutsumi H (2008)
Bioremediation of organically enriched sediment deposited below fish farms with artificially
mass-cultured colonies of a deposit-feeding polychaete Capitella sp. I Fish Sci 74:77–87. https://
doi.org/10.1111/j.1444-2906.2007.01498.x
Kiran YK, Barkat A, Cui X, Ying F, Pan F, Lin T, Yang X (2017) Cow manure and cow manurederived biochar application as a soil amendment for reducing cadmium availability and accumulation by Brassica chinensis L. in acidic red soil. J Integr Agric 16:725–734. http://doi.org/10.
1016/S2095-3119(16)61488-0
Kodama Y, Shumway M, Leinonen R (2011) The sequence read archive: explosive growth of
sequencing data. Nucleic Acids Res 40:D54–D56. https://doi.org/10.1093/nar/gkr854
Kousha M, Daneshvar E, Sohrabi MS, Koutahzadeh N, Khataee AR (2012) Optimization of CI
Acid black 1 biosorption by Cystoseira indica and Gracilaria persica biomasses from aqueous
solutions. Int Biodeter Biodegr 67:56–63. https://doi.org/10.1016/j.ibiod.2011.10.007
Kuhn BM, Nodzy´ nski T, Errafi S, Bucher R, Gupta S, Aryal B, Dobrev P, Bigler L, Geisler M,
Zažímalová E, Friml J, Ringli C (2017) Flavonol-induced changes in PIN2 polarity and auxin
transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Sci Rep 7:41906.
https://doi.org/10.1038/srep41906
Kumar A, Verma JP (2018) Does plant-microbe interaction confer stress tolerance in plants: a
review? Microbiol Res 207:41–52. https://doi.org/10.1016/j.micres.2017.11.004
Kumar P, Dubey RC, Maheshwari DK (2012) Bacillus strains isolated from rhizosphere showed
plant growth promoting and antagonistic activity against phytopathogens. Microbiol Res
167(8):493–499