198
H. B. Slama et al.
Doherty M, Yager PL, Moran MA, Coles VJ, Fortunato CS, Krusche AV, Medeiros PM, Payet
JP, Richey JE, Satinsky BM (2017) Bacterial biogeography across the Amazon River-ocean
continuum. Front Microbiol 8:882. https://doi.org/10.3389/fmicb.2017.00882
Du H, Liu H, Xiong L (2013) Endogenous auxin and jasmonic acid levels are differentially
modulated by abiotic stresses in rice. Front Plant Sci 4:397. https://doi.org/10.3389/fpls.2013.
00397
Eevers N, Gielen M, Sánchez-López A, Jaspers S, White JC, Vangronsveld J, Weyens N (2015)
Optimization of isolation and cultivation of bacterial endophytes through addition of plant extract
to nutrient media. Microb Biotechnol 8:707–715. https://doi.org/10.1111/1751-7915.12291
Fakruddin M, Mannan K (2013) Methods for analyzing diversity of microbial communities in
natural environments. Ceylon J Sci (Biol Sci) 42(1):19–33. https://doi.org/10.4038/cjsbs.v42i1.
5896
Finkel OM, Salas-González I, Castrillo G, Spaepen S, Law TF, Teixeira PJPL, Jones CD, Dangl JL
(2019) The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate
starvation response. PLoS Biol 17(11):e3000534. https://doi.org/10.1371/journal.pbio.3000534
Gaby JC, Buckley DH (2011) A global census of nitrogenase diversity. Environ Microbiol 13:1790–
1799. https://doi.org/10.1111/j.1462-2920.2011.02488.x
Gamalero E, Glick BR (2015) Bacterial modulation of plant ethylene levels. Plant Physiol 169:13–
22. https://doi.org/10.1104/pp.15.00284
Gianoulis TA, Griffin MA, Spakowicz DJ, Dunican BF, Sboner A, Sismour AM, Kodira C, Egholm
M, Church GM, Gerstein MB (2012) Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides. PLoS Genet 8:e1002558. https://doi.org/10.
1371/journal.pgen.1002558
Glick BR (2010) Using soil bacteria to facilitate phytoremediation. Biotechnol Adv 28:367–374.
https://doi.org/10.1016/j.biotechadv.2010.02.001
Glick BR (2012) Plant growth-promoting bacteria: mechanisms and applications. Scientifica 2012.
http://doi.org/10.6064/2012/963401
Glick BR, Todorovic B, Czarny J, Cheng Z, Duan J, McConkey B (2007) Promotion of plant growth
by bacterial ACC deaminase. Crit Rev Plant Sci 26:227–242. https://doi.org/10.1080/073526807
01572966
Godstime CO, Felix OE, Augustina OJ, Christopher OC (2014) Mechanisms of antimicrobial actions
of phytochemicals against enteric pathogens—a review. J Pharm Chem Biol Sci 2:77–85
Gond SK, Bergen MS, Torres MS, White JF, Kharwar RN (2015) Effect of bacterial endophyte
on expression of defense genes in Indian popcorn against Fusarium moniliforme. Symbiosis
66:133–140. https://doi.org/10.1007/s13199-015-0348-9
Goswami D, Thakker JN, Dhandhukia PC (2016) Portraying mechanics of plant growth promoting
rhizobacteria (PGPR): a review. Cogent Food Agric 2:1127500. https://doi.org/10.1080/233
11932.2015.1127500
Goulart MC, Cueva-Yesquén LG, Hidalgo Martinez KJ, Attili-Angelis D, Fantinatti-Garboggini
F (2019) Comparison of specific endophytic bacterial communities in different developmental stages of Passiflora incarnata using culture-dependent and culture-independent analysis.
Microbiol Open 8(10):e896. https://doi.org/10.1002/mbo3.896
Govarthanan M, Mythili R, Selvankumar T, Kamala-Kannan S, Rajasekar A, Chang Y-C (2016)
Bioremediation of heavy metals using an endophytic bacterium Paenibacillus sp. RM isolated
from the roots of Tridax procumbens. 3 Biotech 6:242. https://doi.org/10.1007/s13205-0160560-1
Griffin MR (2014) Biocontrol and bioremediation: two areas of endophytic research which hold
great promise. In: Advances in endophytic research. Springer, New York, pp 257–282
Großkinsky DK, Tafner R, Moreno MV, Stenglein SA, García de Salamone IE, Nelson LM, Novák O,
Strnad M, van der Graaff E, Roitsch T (2016) Cytokinin production by Pseudomonas fluorescens
G20-18 determines biocontrol activity against Pseudomonas syringae in Arabidopsis. Sci Rep
6:23310. https://doi.org/10.1038/srep23310
H. B. Slama et al.
Doherty M, Yager PL, Moran MA, Coles VJ, Fortunato CS, Krusche AV, Medeiros PM, Payet
JP, Richey JE, Satinsky BM (2017) Bacterial biogeography across the Amazon River-ocean
continuum. Front Microbiol 8:882. https://doi.org/10.3389/fmicb.2017.00882
Du H, Liu H, Xiong L (2013) Endogenous auxin and jasmonic acid levels are differentially
modulated by abiotic stresses in rice. Front Plant Sci 4:397. https://doi.org/10.3389/fpls.2013.
00397
Eevers N, Gielen M, Sánchez-López A, Jaspers S, White JC, Vangronsveld J, Weyens N (2015)
Optimization of isolation and cultivation of bacterial endophytes through addition of plant extract
to nutrient media. Microb Biotechnol 8:707–715. https://doi.org/10.1111/1751-7915.12291
Fakruddin M, Mannan K (2013) Methods for analyzing diversity of microbial communities in
natural environments. Ceylon J Sci (Biol Sci) 42(1):19–33. https://doi.org/10.4038/cjsbs.v42i1.
5896
Finkel OM, Salas-González I, Castrillo G, Spaepen S, Law TF, Teixeira PJPL, Jones CD, Dangl JL
(2019) The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate
starvation response. PLoS Biol 17(11):e3000534. https://doi.org/10.1371/journal.pbio.3000534
Gaby JC, Buckley DH (2011) A global census of nitrogenase diversity. Environ Microbiol 13:1790–
1799. https://doi.org/10.1111/j.1462-2920.2011.02488.x
Gamalero E, Glick BR (2015) Bacterial modulation of plant ethylene levels. Plant Physiol 169:13–
22. https://doi.org/10.1104/pp.15.00284
Gianoulis TA, Griffin MA, Spakowicz DJ, Dunican BF, Sboner A, Sismour AM, Kodira C, Egholm
M, Church GM, Gerstein MB (2012) Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides. PLoS Genet 8:e1002558. https://doi.org/10.
1371/journal.pgen.1002558
Glick BR (2010) Using soil bacteria to facilitate phytoremediation. Biotechnol Adv 28:367–374.
https://doi.org/10.1016/j.biotechadv.2010.02.001
Glick BR (2012) Plant growth-promoting bacteria: mechanisms and applications. Scientifica 2012.
http://doi.org/10.6064/2012/963401
Glick BR, Todorovic B, Czarny J, Cheng Z, Duan J, McConkey B (2007) Promotion of plant growth
by bacterial ACC deaminase. Crit Rev Plant Sci 26:227–242. https://doi.org/10.1080/073526807
01572966
Godstime CO, Felix OE, Augustina OJ, Christopher OC (2014) Mechanisms of antimicrobial actions
of phytochemicals against enteric pathogens—a review. J Pharm Chem Biol Sci 2:77–85
Gond SK, Bergen MS, Torres MS, White JF, Kharwar RN (2015) Effect of bacterial endophyte
on expression of defense genes in Indian popcorn against Fusarium moniliforme. Symbiosis
66:133–140. https://doi.org/10.1007/s13199-015-0348-9
Goswami D, Thakker JN, Dhandhukia PC (2016) Portraying mechanics of plant growth promoting
rhizobacteria (PGPR): a review. Cogent Food Agric 2:1127500. https://doi.org/10.1080/233
11932.2015.1127500
Goulart MC, Cueva-Yesquén LG, Hidalgo Martinez KJ, Attili-Angelis D, Fantinatti-Garboggini
F (2019) Comparison of specific endophytic bacterial communities in different developmental stages of Passiflora incarnata using culture-dependent and culture-independent analysis.
Microbiol Open 8(10):e896. https://doi.org/10.1002/mbo3.896
Govarthanan M, Mythili R, Selvankumar T, Kamala-Kannan S, Rajasekar A, Chang Y-C (2016)
Bioremediation of heavy metals using an endophytic bacterium Paenibacillus sp. RM isolated
from the roots of Tridax procumbens. 3 Biotech 6:242. https://doi.org/10.1007/s13205-0160560-1
Griffin MR (2014) Biocontrol and bioremediation: two areas of endophytic research which hold
great promise. In: Advances in endophytic research. Springer, New York, pp 257–282
Großkinsky DK, Tafner R, Moreno MV, Stenglein SA, García de Salamone IE, Nelson LM, Novák O,
Strnad M, van der Graaff E, Roitsch T (2016) Cytokinin production by Pseudomonas fluorescens
G20-18 determines biocontrol activity against Pseudomonas syringae in Arabidopsis. Sci Rep
6:23310. https://doi.org/10.1038/srep23310